VTR
8 main matches found
(8 matches in total )Execution time: 53.0 seconds
Match RMSD = 0.68
VTR = 0.02
Average AVD = 0.65 Å
Parameters
Chains(7KXK.pdb ): B versus J
Chains(7KXK_africa_mut.pdb ) B versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7KXK | 4383 | 0 | 4 | 2 | 0 | 5 | 0 | 11 |
| B7KXK_africa_mut | 4374 | 0 | 4 | 2 | 0 | 4 | 0 | 10 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| B-J | B-J | D427 | K72 | D427 | K72 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.42 | View |
| B-J | B-J | K462 | E97 | K462 | E97 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.59 | View |
| B-J | B-J | D428 | D69 | D428 | D69 | Repulsive | Repulsive | 0.91 | View |
| B-J | B-J | D428 | D69 | D428 | D69 | Repulsive | Repulsive | 0.85 | View |
| B-J | B-J | D427 | D69 | D427 | D69 | Repulsive | Repulsive | 0.41 | View |
| B-J | B-J | D428 | D69 | D428 | D69 | Repulsive | Repulsive | 0.94 | View |
| B-J | B-J | D427 | K72 | D427 | K72 | Attractive | Attractive | 0.43 | View |
| B-J | B-J | K462 | E97 | K462 | E97 | Attractive | Attractive | 0.66 | View |