Execution time: 47.0 seconds
Match RMSD = 0.64
VTR = 0.02
Average AVD = 0.62 Å
Chains(7KXJ.pdb ): C versus N
Chains(7KXJ_africa_mut.pdb ) C versus N
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KXJ | 4389 | 24 | 6 | 6 | 0 | 1 | 3 | 40 |
B7KXJ_africa_mut | 4380 | 26 | 5 | 5 | 0 | 1 | 3 | 40 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-N | C-N | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.7 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.66 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.66 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.8 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.8 | View |
C-N | C-N | F456 | H108 | F456 | H108 | Hydrophobic | Hydrophobic | 0.66 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.68 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.39 | View |
C-N | C-N | E406 | D66 | E406 | D66 | Repulsive | Repulsive | 0.69 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.59 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.5 | View |
C-N | C-N | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.79 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.45 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.72 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.76 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.62 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.46 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.39 | View |
C-N | C-N | Y473 | H108 | Y473 | H108 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.62 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.7 | View |
C-N | C-N | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.87 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Aromatic Stacking | Aromatic Stacking | 0.5 | View |
C-N | C-N | F456 | H108 | F456 | H108 | Hydrophobic | Hydrophobic | 0.42 | View |
C-N | C-N | N487 | T109 | N487 | T109 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
C-N | C-N | F456 | A38 | F456 | A38 | Hydrophobic | Hydrophobic | 0.54 | View |
C-N | C-N | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.97 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.65 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.73 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.62 | View |
C-N | C-N | Y473 | H108 | Y473 | H108 | Aromatic Stacking | Aromatic Stacking | 0.46 | View |
C-N | C-N | F456 | H108 | F456 | H108 | Aromatic Stacking | Aromatic Stacking | 0.57 | View |
C-N | C-N | F456 | A38 | F456 | A38 | Hydrophobic | Hydrophobic | 0.45 | View |
C-N | C-N | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.72 | View |
C-N | C-N | Y505 | S69 | Y505 | S69 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KXJ | C-N | K417 | S65 | Hydrogen Bonds | 3.74 | View |
7KXJ | C-N | K417 | D66 | Attractive, Hydrogen Bonds | 2.36 | View |
7KXJ | C-N | K417 | D66 | Attractive, Hydrogen Bonds | 3.55 | View |
7KXJ_africa_mut | C-N | R403 | D66 | Attractive | 5.89 | View |
7KXJ_africa_mut | C-N | N417 | S65 | Hydrogen Bonds | 3.81 | View |
7KXJ_africa_mut | C-N | F486 | Y114 | Hydrophobic | 4.23 | View |
7KXJ_africa_mut | C-N | F486 | Y114 | Hydrophobic | 4.45 | View |
7KXJ_africa_mut | C-N | Y505 | S69 | Hydrogen Bonds | 3.78 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |