Execution time: 56.0 seconds
Match RMSD = 0.55
VTR = 0.03
Average AVD = 0.52 Å
Chains(7KXJ.pdb ): B versus I
Chains(7KXJ_africa_mut.pdb ) B versus I
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KXJ | 4389 | 32 | 0 | 0 | 0 | 0 | 2 | 34 |
B7KXJ_africa_mut | 4380 | 46 | 0 | 0 | 0 | 0 | 2 | 48 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.57 | View |
B-I | B-I | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.8 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.63 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.37 | View |
B-I | B-I | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.27 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.55 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.7 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.62 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.69 | View |
B-I | B-I | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.2 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.93 | View |
B-I | B-I | Q493 | Y109 | Q493 | Y109 | Hydrophobic | Hydrophobic | 0.23 | View |
B-I | B-I | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.19 | View |
B-I | B-I | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.77 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.37 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Aromatic Stacking | Aromatic Stacking | 0.46 | View |
B-I | B-I | Q493 | Y108 | Q493 | Y108 | Hydrophobic | Hydrophobic | 0.52 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.86 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.37 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.68 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.7 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Aromatic Stacking | Aromatic Stacking | 0.45 | View |
B-I | B-I | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.61 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.48 | View |
B-I | B-I | Q493 | Y109 | Q493 | Y109 | Hydrophobic | Hydrophobic | 0.13 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.38 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.54 | View |
B-I | B-I | F486 | Y57 | F486 | Y57 | Hydrophobic | Hydrophobic | 0.53 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.67 | View |
B-I | B-I | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.47 | View |
B-I | B-I | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.53 | View |
B-I | B-I | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.39 | View |
B-I | B-I | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.35 | View |
B-I | B-I | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.59 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KXJ_africa_mut | B-I | K484 | Y109 | Hydrophobic | 4.26 | View |
7KXJ_africa_mut | B-I | K484 | Y110 | Hydrophobic | 4.19 | View |
7KXJ_africa_mut | B-I | K484 | Y110 | Hydrophobic | 4.47 | View |
7KXJ_africa_mut | B-I | K484 | Y110 | Hydrophobic | 4.02 | View |
7KXJ_africa_mut | B-I | K484 | Y110 | Hydrophobic | 3.04 | View |
7KXJ_africa_mut | B-I | K484 | Y110 | Hydrophobic | 3.41 | View |
7KXJ_africa_mut | B-I | F486 | A64 | Hydrophobic | 4.48 | View |
7KXJ_africa_mut | B-I | F486 | A66 | Hydrophobic | 4.38 | View |
7KXJ_africa_mut | B-I | F486 | Y110 | Hydrophobic | 4.13 | View |
7KXJ_africa_mut | B-I | F486 | Y110 | Hydrophobic | 4.47 | View |
7KXJ_africa_mut | B-I | F486 | Y110 | Hydrophobic | 4.48 | View |
7KXJ_africa_mut | B-I | Y489 | Y109 | Hydrophobic | 3.88 | View |
7KXJ_africa_mut | B-I | Y489 | Y109 | Hydrophobic | 4.49 | View |
7KXJ_africa_mut | B-I | Y489 | Y109 | Hydrophobic | 4.49 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |