Execution time: 112.0 seconds
Match RMSD = 0.64
VTR = 0.01
Average AVD = 0.59 Å
Chains(7KXJ.pdb ): A versus L
Chains(7KXJ_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KXJ | 4389 | 8 | 11 | 13 | 0 | 1 | 3 | 36 |
B7KXJ_africa_mut | 4380 | 8 | 12 | 14 | 0 | 2 | 3 | 39 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.61 | View |
A-L | A-L | Y421 | R80 | Y421 | R80 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
A-L | A-L | N487 | Y114 | N487 | Y114 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
A-L | A-L | Y505 | L67 | Y505 | L67 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
A-L | A-L | D405 | D66 | D405 | D66 | Repulsive | Repulsive | 0.86 | View |
A-L | A-L | N487 | Y114 | N487 | Y114 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.6 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.7 | View |
A-L | A-L | Y505 | S69 | Y505 | S69 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.37 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.6 | View |
A-L | A-L | Y473 | H108 | Y473 | H108 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
A-L | A-L | K417 | S37 | N417 | S37 | Hydrogen Bonds | Hydrogen Bonds | 1.37 | View |
A-L | A-L | Y421 | R80 | Y421 | R80 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Aromatic Stacking | Aromatic Stacking | 0.39 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.38 | View |
A-L | A-L | F456 | H108 | F456 | H108 | Aromatic Stacking | Aromatic Stacking | 0.47 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.35 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.69 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.43 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.33 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.69 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.7 | View |
A-L | A-L | D420 | R80 | D420 | R80 | Attractive | Attractive | 0.6 | View |
A-L | A-L | D420 | R80 | D420 | R80 | Attractive | Attractive | 0.72 | View |
A-L | A-L | A475 | T109 | A475 | T109 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.39 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.35 | View |
A-L | A-L | Y505 | D66 | Y505 | D66 | Hydrogen Bonds | Hydrogen Bonds | 0.94 | View |
A-L | A-L | K417 | S36 | N417 | S36 | Hydrogen Bonds | Hydrogen Bonds | 1.22 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.59 | View |
A-L | A-L | D420 | R80 | D420 | R80 | Attractive | Attractive | 0.77 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.48 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |