Execution time: 54.0 seconds
Match RMSD = 0.6
VTR = 0.02
Average AVD = 0.57 Å
Chains(7KXJ.pdb ): A versus H
Chains(7KXJ_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KXJ | 4389 | 31 | 0 | 1 | 0 | 0 | 2 | 34 |
B7KXJ_africa_mut | 4380 | 39 | 0 | 1 | 0 | 0 | 2 | 42 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.62 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.79 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.88 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.62 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.54 | View |
A-H | A-H | F486 | Y57 | F486 | Y57 | Hydrophobic | Hydrophobic | 0.46 | View |
A-H | A-H | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.85 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.75 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.6 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.43 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.68 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.66 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.53 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Aromatic Stacking | Aromatic Stacking | 0.65 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.69 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Aromatic Stacking | Aromatic Stacking | 0.5 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.56 | View |
A-H | A-H | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.54 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.67 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.7 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.74 | View |
A-H | A-H | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.57 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.63 | View |
A-H | A-H | N487 | Y110 | N487 | Y110 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
A-H | A-H | Q493 | Y109 | Q493 | Y109 | Hydrophobic | Hydrophobic | 0.19 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.4 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KXJ | A-H | Y489 | Y110 | Hydrophobic | 4.45 | View |
7KXJ_africa_mut | A-H | K484 | Y109 | Hydrophobic | 4.46 | View |
7KXJ_africa_mut | A-H | K484 | Y110 | Hydrophobic | 3.65 | View |
7KXJ_africa_mut | A-H | K484 | Y110 | Hydrophobic | 3.96 | View |
7KXJ_africa_mut | A-H | K484 | Y110 | Hydrophobic | 3.84 | View |
7KXJ_africa_mut | A-H | K484 | Y110 | Hydrophobic | 4.09 | View |
7KXJ_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.08 | View |
7KXJ_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.07 | View |
7KXJ_africa_mut | A-H | Y489 | Y109 | Hydrophobic | 4.23 | View |
7KXJ_africa_mut | A-H | Y489 | Y109 | Hydrophobic | 3.91 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |