Execution time: 52.0 seconds
Match RMSD = 0.37
VTR = 0.01
Average AVD = 0.33 Å
Chains(7KML.pdb ): C versus J
Chains(7KML_africa_mut.pdb ) C versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KML | 4413 | 27 | 0 | 2 | 0 | 0 | 2 | 31 |
B7KML_africa_mut | 4404 | 36 | 0 | 4 | 0 | 0 | 2 | 42 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-J | C-J | F456 | F113 | F456 | F113 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.37 | View |
C-J | C-J | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.19 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.26 | View |
C-J | C-J | Q493 | Y109 | Q493 | Y109 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
C-J | C-J | F456 | F113 | F456 | F113 | Hydrophobic | Hydrophobic | 0.26 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.29 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.23 | View |
C-J | C-J | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.35 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.25 | View |
C-J | C-J | F456 | F113 | F456 | F113 | Hydrophobic | Hydrophobic | 0.25 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.23 | View |
C-J | C-J | F486 | Y57 | F486 | Y57 | Hydrophobic | Hydrophobic | 0.27 | View |
C-J | C-J | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.57 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.29 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
C-J | C-J | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.32 | View |
C-J | C-J | L455 | F113 | L455 | F113 | Hydrophobic | Hydrophobic | 0.41 | View |
C-J | C-J | Y489 | Y110 | Y489 | Y110 | Hydrophobic | Hydrophobic | 0.39 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.26 | View |
C-J | C-J | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.38 | View |
C-J | C-J | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.21 | View |
C-J | C-J | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.36 | View |
C-J | C-J | F456 | F113 | F456 | F113 | Hydrophobic | Hydrophobic | 0.28 | View |
C-J | C-J | Y489 | Y110 | Y489 | Y110 | Hydrogen Bonds | Hydrogen Bonds | 0.95 | View |
C-J | C-J | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.33 | View |
C-J | C-J | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.22 | View |
C-J | C-J | E484 | Y110 | K484 | Y110 | Hydrophobic | Hydrophobic | 0.61 | View |
C-J | C-J | F456 | F113 | F456 | F113 | Hydrophobic | Hydrophobic | 0.29 | View |
C-J | C-J | L455 | F113 | L455 | F113 | Hydrophobic | Hydrophobic | 0.41 | View |
C-J | C-J | F486 | Y57 | F486 | Y57 | Hydrophobic | Hydrophobic | 0.16 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KML_africa_mut | C-J | L455 | F113 | Hydrophobic | 4.32 | View |
7KML_africa_mut | C-J | K484 | Y110 | Hydrophobic | 3.75 | View |
7KML_africa_mut | C-J | K484 | Y110 | Hydrophobic | 3.94 | View |
7KML_africa_mut | C-J | K484 | Y110 | Hydrophobic | 3.91 | View |
7KML_africa_mut | C-J | K484 | Y110 | Hydrophobic | 4.26 | View |
7KML_africa_mut | C-J | F486 | A66 | Hydrophobic | 4.13 | View |
7KML_africa_mut | C-J | F486 | A66 | Hydrophobic | 4.44 | View |
7KML_africa_mut | C-J | F486 | Y110 | Hydrophobic | 4.31 | View |
7KML_africa_mut | C-J | F486 | Y110 | Hydrophobic | 4.22 | View |
7KML_africa_mut | C-J | Y489 | G111 | Hydrogen Bonds | 3.57 | View |
7KML_africa_mut | C-J | Y489 | G112 | Hydrogen Bonds | 3.78 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |