Execution time: 107.0 seconds
Match RMSD = 0.38
VTR = 0.01
Average AVD = 0.36 Å
Chains(7KML.pdb ): A versus L
Chains(7KML_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KML | 4413 | 9 | 10 | 9 | 0 | 3 | 2 | 33 |
B7KML_africa_mut | 4404 | 11 | 8 | 9 | 0 | 3 | 2 | 33 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.35 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.25 | View |
A-L | A-L | Y473 | H108 | Y473 | H108 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.29 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.34 | View |
A-L | A-L | Y421 | R80 | Y421 | R80 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-L | A-L | E406 | D66 | E406 | D66 | Repulsive | Repulsive | 0.43 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.44 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.25 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.35 | View |
A-L | A-L | E406 | D66 | E406 | D66 | Repulsive | Repulsive | 0.59 | View |
A-L | A-L | A475 | T109 | A475 | T109 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.25 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.34 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.39 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.59 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.41 | View |
A-L | A-L | N487 | Y114 | N487 | Y114 | Hydrogen Bonds | Hydrogen Bonds | 0.14 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.26 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Hydrophobic | Hydrophobic | 0.3 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.46 | View |
A-L | A-L | D405 | D66 | D405 | D66 | Repulsive | Repulsive | 0.29 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.51 | View |
A-L | A-L | Y473 | H108 | Y473 | H108 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
A-L | A-L | R403 | D66 | R403 | D66 | Attractive | Attractive | 0.3 | View |
A-L | A-L | F486 | Y114 | F486 | Y114 | Aromatic Stacking | Aromatic Stacking | 0.27 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KML | A-L | K417 | S56 | Hydrogen Bonds | 3.06 | View |
7KML | A-L | K417 | D66 | Attractive | 4.23 | View |
7KML | A-L | K417 | D66 | Attractive, Hydrogen Bonds | 3.53 | View |
7KML_africa_mut | A-L | N417 | S37 | Hydrogen Bonds | 2.87 | View |
7KML_africa_mut | A-L | F486 | Y114 | Hydrophobic | 4.45 | View |
7KML_africa_mut | A-L | F486 | Y114 | Hydrophobic | 4.36 | View |
7KML_africa_mut | A-L | Y489 | H108 | Hydrogen Bonds | 3.70 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |