Execution time: 63.0 seconds
Match RMSD = 0.53
VTR = 0.03
Average AVD = 0.5 Å
Chains(7KMK.pdb ): A versus H
Chains(7KMK_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMK | 3952 | 33 | 0 | 5 | 0 | 0 | 3 | 41 |
B7KMK_africa_mut | 3943 | 43 | 0 | 4 | 0 | 0 | 3 | 50 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.55 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.53 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.52 | View |
A-H | A-H | C488 | Y109 | C488 | Y109 | Hydrogen Bonds | Hydrogen Bonds | 1.06 | View |
A-H | A-H | L455 | F113 | L455 | F113 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | L455 | F113 | L455 | F113 | Hydrophobic | Hydrophobic | 0.38 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.24 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.55 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Aromatic Stacking | Aromatic Stacking | 0.63 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.49 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.4 | View |
A-H | A-H | F486 | Y57 | F486 | Y57 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.42 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.64 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.45 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.51 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.46 | View |
A-H | A-H | Q493 | F113 | Q493 | F113 | Hydrophobic | Hydrophobic | 0.37 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.42 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Aromatic Stacking | Aromatic Stacking | 0.45 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.4 | View |
A-H | A-H | Q493 | F113 | Q493 | F113 | Hydrophobic | Hydrophobic | 0.41 | View |
A-H | A-H | E484 | Y109 | K484 | Y109 | Hydrophobic | Hydrophobic | 1.05 | View |
A-H | A-H | F486 | A66 | F486 | A66 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | Y489 | F113 | Y489 | F113 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.57 | View |
A-H | A-H | F486 | A64 | F486 | A64 | Hydrophobic | Hydrophobic | 0.55 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.3 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.62 | View |
A-H | A-H | Y489 | Y109 | Y489 | Y109 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | G485 | Y109 | G485 | Y109 | Hydrogen Bonds | Hydrogen Bonds | 0.89 | View |
A-H | A-H | Y489 | F113 | Y489 | F113 | Aromatic Stacking | Aromatic Stacking | 0.41 | View |
A-H | A-H | F486 | Y110 | F486 | Y110 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | Y489 | F113 | Y489 | F113 | Hydrophobic | Hydrophobic | 0.4 | View |
A-H | A-H | L455 | F113 | L455 | F113 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | Q493 | Y108 | Q493 | Y108 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMK | A-H | E484 | Y109 | Hydrogen Bonds | 3.70 | View |
7KMK | A-H | E484 | Y110 | Hydrophobic | 4.49 | View |
7KMK | A-H | F490 | Y109 | Hydrogen Bonds | 3.54 | View |
7KMK_africa_mut | A-H | K484 | Y109 | Hydrophobic | 4.42 | View |
7KMK_africa_mut | A-H | G485 | Y109 | Hydrogen Bonds | 3.71 | View |
7KMK_africa_mut | A-H | F486 | Y57 | Hydrophobic | 4.27 | View |
7KMK_africa_mut | A-H | F486 | A66 | Hydrophobic | 4.18 | View |
7KMK_africa_mut | A-H | F486 | A66 | Hydrophobic | 4.34 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.39 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.26 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 3.67 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.32 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 3.34 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 4.49 | View |
7KMK_africa_mut | A-H | F486 | Y110 | Hydrophobic | 3.96 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |