Execution time: 11.0 seconds
Match RMSD = 0.74
VTR = 0.06
Average AVD = 0.62 Å
Chains(7KMI.pdb ): C versus B
Chains(7KMI_africa_mut.pdb ) C versus B
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMI | 627 | 4 | 0 | 14 | 0 | 0 | 0 | 18 |
B7KMI_africa_mut | 627 | 9 | 0 | 16 | 0 | 0 | 0 | 25 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-C | B-C | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
B-C | B-C | I29 | Y505 | I29 | Y501 | Hydrophobic | Hydrophobic | 1.37 | View |
B-C | B-C | G28 | G502 | G28 | G502 | Hydrogen Bonds | Hydrogen Bonds | 1.3 | View |
B-C | B-C | S30 | Q498 | S30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
B-C | B-C | I29 | Y505 | I29 | Y505 | Hydrophobic | Hydrophobic | 0.63 | View |
B-C | B-C | S30 | G496 | S30 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-C | B-C | W32 | Y495 | W32 | Y495 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
B-C | B-C | G28 | T500 | G28 | Y501 | Hydrogen Bonds | Hydrogen Bonds | 1.47 | View |
B-C | B-C | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
B-C | B-C | Q90 | Y505 | Q90 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
B-C | B-C | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
B-C | B-C | I2 | Y505 | I2 | Y505 | Hydrophobic | Hydrophobic | 0.46 | View |
B-C | B-C | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
B-C | B-C | I2 | Y505 | I2 | Y505 | Hydrophobic | Hydrophobic | 0.4 | View |
B-C | B-C | S30 | Q498 | S30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMI | B-C | S30 | N501 | Hydrogen Bonds | 3.52 | View |
7KMI | B-C | S30 | N501 | Hydrogen Bonds | 2.77 | View |
7KMI | B-C | S30 | N501 | Hydrogen Bonds | 3.71 | View |
7KMI_africa_mut | B-C | I2 | Y501 | Hydrophobic | 4.43 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrophobic | 3.76 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrophobic | 3.17 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrophobic | 3.98 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrophobic | 3.91 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrogen Bonds | 2.68 | View |
7KMI_africa_mut | B-C | Q27 | Y501 | Hydrogen Bonds | 3.79 | View |
7KMI_africa_mut | B-C | Q27 | G502 | Hydrogen Bonds | 3.80 | View |
7KMI_africa_mut | B-C | Q27 | V503 | Hydrogen Bonds | 3.49 | View |
7KMI_africa_mut | B-C | N92 | Y505 | Hydrogen Bonds | 3.81 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |