Execution time: 11.0 seconds
Match RMSD = 0.52
VTR = 0.04
Average AVD = 0.49 Å
Chains(7KMH.pdb ): C versus B
Chains(7KMH_africa_mut.pdb ) C versus B
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMH | 616 | 3 | 9 | 10 | 0 | 0 | 0 | 22 |
B7KMH_africa_mut | 616 | 5 | 7 | 11 | 0 | 0 | 0 | 23 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.61 | View |
B-C | B-C | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.34 | View |
B-C | B-C | D92 | Y505 | D92 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
B-C | B-C | Q27 | D405 | Q27 | D405 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.49 | View |
B-C | B-C | N93 | Y505 | N93 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
B-C | B-C | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.32 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.33 | View |
B-C | B-C | N93 | R403 | N93 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
B-C | B-C | N93 | Y505 | N93 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.33 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.77 | View |
B-C | B-C | N93 | R403 | N93 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.61 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Attractive | Attractive | 0.31 | View |
B-C | B-C | D92 | R403 | D92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.86 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMH | B-C | D28 | G502 | Hydrogen Bonds | 2.87 | View |
7KMH | B-C | D28 | Y505 | Hydrophobic | 4.32 | View |
7KMH | B-C | D92 | K417 | Attractive, Hydrogen Bonds | 3.60 | View |
7KMH | B-C | D92 | K417 | Attractive | 4.97 | View |
7KMH_africa_mut | B-C | D28 | Y501 | Hydrogen Bonds | 3.78 | View |
7KMH_africa_mut | B-C | D28 | Y501 | Hydrophobic | 4.47 | View |
7KMH_africa_mut | B-C | D28 | Y501 | Hydrophobic | 3.12 | View |
7KMH_africa_mut | B-C | D28 | Y501 | Hydrophobic | 2.87 | View |
7KMH_africa_mut | B-C | D28 | Y501 | Hydrogen Bonds | 2.82 | View |
7KMH_africa_mut | B-C | I29 | Y505 | Hydrogen Bonds | 2.72 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |