Execution time: 15.0 seconds
Match RMSD = 0.4
VTR = 0.01
Average AVD = 0.35 Å
Chains(7KMH.pdb ): C versus A
Chains(7KMH_africa_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMH | 616 | 23 | 0 | 29 | 0 | 0 | 1 | 53 |
B7KMH_africa_mut | 616 | 21 | 0 | 32 | 0 | 0 | 1 | 54 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.33 | View |
A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.26 | View |
A-C | A-C | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
A-C | A-C | S31 | Q474 | S31 | Q474 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
A-C | A-C | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-C | A-C | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
A-C | A-C | Y52 | K417 | Y52 | N417 | Hydrophobic | Hydrophobic | 1.2 | View |
A-C | A-C | T28 | S477 | T28 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
A-C | A-C | G102 | Y489 | G102 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.45 | View |
A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
A-C | A-C | S53 | Y473 | S53 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
A-C | A-C | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-C | A-C | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.23 | View |
A-C | A-C | S53 | R457 | S53 | R457 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.16 | View |
A-C | A-C | Y100 | F456 | Y100 | F456 | Hydrophobic | Hydrophobic | 0.24 | View |
A-C | A-C | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
A-C | A-C | G54 | N460 | G54 | N460 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-C | A-C | G26 | N487 | G26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.34 | View |
A-C | A-C | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.31 | View |
A-C | A-C | Y33 | F456 | Y33 | F456 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
A-C | A-C | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.27 | View |
A-C | A-C | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
A-C | A-C | Y58 | T415 | Y58 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
A-C | A-C | Y58 | T415 | Y58 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.77 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.44 | View |
A-C | A-C | Y58 | G416 | Y58 | G416 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.2 | View |
A-C | A-C | T28 | G476 | T28 | G476 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.16 | View |
A-C | A-C | S30 | K458 | S30 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.22 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.14 | View |
A-C | A-C | S30 | K458 | S30 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
A-C | A-C | Y100 | F456 | Y100 | F456 | Hydrophobic | Hydrophobic | 0.23 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.49 | View |
A-C | A-C | Y100 | L455 | Y100 | L455 | Hydrophobic | Hydrophobic | 0.16 | View |
A-C | A-C | S31 | K458 | S31 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
A-C | A-C | G54 | K458 | G54 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMH | A-C | Y33 | K417 | Hydrophobic | 4.44 | View |
7KMH | A-C | Y100 | K417 | Hydrophobic | 3.78 | View |
7KMH | A-C | Y100 | K417 | Hydrogen Bonds | 2.95 | View |
7KMH_africa_mut | A-C | T28 | A475 | Hydrogen Bonds | 3.36 | View |
7KMH_africa_mut | A-C | S31 | A475 | Hydrogen Bonds | 3.69 | View |
7KMH_africa_mut | A-C | Y33 | N417 | Hydrogen Bonds | 2.75 | View |
7KMH_africa_mut | A-C | S53 | K458 | Hydrogen Bonds | 3.68 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |