Execution time: 10.0 seconds
Match RMSD = 0.31
VTR = 0.02
Average AVD = 0.3 Å
Chains(7KMG.pdb ): F versus E
Chains(7KMG_africa_mut.pdb ) F versus E
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMG | 1255 | 19 | 6 | 3 | 0 | 0 | 2 | 30 |
B7KMG_africa_mut | 1255 | 21 | 0 | 2 | 0 | 0 | 2 | 25 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-F | E-F | R96 | E484 | R96 | K484 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.26 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.25 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.27 | View |
E-F | E-F | Y32 | F486 | Y32 | F486 | Hydrophobic | Hydrophobic | 0.37 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.21 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.25 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.3 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.2 | View |
E-F | E-F | Y32 | F486 | Y32 | F486 | Hydrophobic | Hydrophobic | 0.43 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
E-F | E-F | T94 | V483 | T94 | V483 | Hydrophobic | Hydrophobic | 0.33 | View |
E-F | E-F | T94 | N481 | T94 | N481 | Hydrophobic | Hydrophobic | 0.3 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Aromatic Stacking | Aromatic Stacking | 0.25 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.39 | View |
E-F | E-F | Y32 | F486 | Y32 | F486 | Hydrophobic | Hydrophobic | 0.4 | View |
E-F | E-F | T94 | V483 | T94 | V483 | Hydrophobic | Hydrophobic | 0.33 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.28 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.4 | View |
E-F | E-F | Y32 | F486 | Y32 | F486 | Hydrophobic | Hydrophobic | 0.33 | View |
E-F | E-F | Y32 | F486 | Y32 | F486 | Aromatic Stacking | Aromatic Stacking | 0.24 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.33 | View |
E-F | E-F | Y92 | F486 | Y92 | F486 | Hydrophobic | Hydrophobic | 0.16 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMG | E-F | R96 | E484 | Attractive | 5.57 | View |
7KMG | E-F | R96 | E484 | Attractive | 5.77 | View |
7KMG | E-F | R96 | E484 | Attractive | 4.41 | View |
7KMG | E-F | R96 | E484 | Attractive | 4.57 | View |
7KMG | E-F | R96 | E484 | Attractive | 4.60 | View |
7KMG | E-F | R96 | E484 | Attractive, Hydrogen Bonds | 3.43 | View |
7KMG_africa_mut | E-F | Y32 | F486 | Hydrophobic | 4.45 | View |
7KMG_africa_mut | E-F | Y92 | F486 | Hydrophobic | 4.36 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |