Execution time: 12.0 seconds
Match RMSD = 0.58
VTR = 0.03
Average AVD = 0.48 Å
Chains(7KMG.pdb ): C versus A
Chains(7KMG_africa_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KMG | 1255 | 38 | 8 | 15 | 0 | 0 | 1 | 62 |
B7KMG_africa_mut | 1255 | 48 | 0 | 12 | 0 | 0 | 1 | 61 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-C | A-C | Y110 | E484 | Y110 | K484 | Hydrophobic | Hydrophobic | 1.8 | View |
A-C | A-C | N59 | V483 | N59 | V483 | Hydrophobic | Hydrophobic | 0.22 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.33 | View |
A-C | A-C | R104 | Q493 | R104 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
A-C | A-C | L55 | L492 | L55 | L492 | Hydrophobic | Hydrophobic | 0.84 | View |
A-C | A-C | N31 | S494 | N31 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-C | A-C | A103 | F456 | A103 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | I52 | F490 | I52 | F490 | Hydrophobic | Hydrophobic | 0.36 | View |
A-C | A-C | N31 | Y449 | N31 | Y449 | Hydrophobic | Hydrophobic | 0.37 | View |
A-C | A-C | L55 | F490 | L55 | F490 | Hydrophobic | Hydrophobic | 0.72 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.29 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.36 | View |
A-C | A-C | R50 | G482 | R50 | G482 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
A-C | A-C | W47 | V483 | W47 | V483 | Hydrophobic | Hydrophobic | 0.23 | View |
A-C | A-C | E102 | S494 | E102 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
A-C | A-C | Y110 | G485 | Y110 | G485 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-C | A-C | I52 | F490 | I52 | F490 | Hydrophobic | Hydrophobic | 0.29 | View |
A-C | A-C | A103 | Q493 | A103 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
A-C | A-C | L55 | T470 | L55 | T470 | Hydrophobic | Hydrophobic | 0.99 | View |
A-C | A-C | N31 | Y449 | N31 | Y449 | Hydrophobic | Hydrophobic | 0.52 | View |
A-C | A-C | W47 | V483 | W47 | V483 | Hydrophobic | Hydrophobic | 0.13 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.31 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.38 | View |
A-C | A-C | L55 | T470 | L55 | T470 | Hydrophobic | Hydrophobic | 1.1 | View |
A-C | A-C | I52 | F490 | I52 | F490 | Hydrophobic | Hydrophobic | 0.29 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Aromatic Stacking | Aromatic Stacking | 0.19 | View |
A-C | A-C | I57 | F490 | I57 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | N31 | Y449 | N31 | Y449 | Hydrophobic | Hydrophobic | 0.4 | View |
A-C | A-C | N31 | Y449 | N31 | Y449 | Hydrophobic | Hydrophobic | 0.49 | View |
A-C | A-C | I52 | F490 | I52 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | L55 | L452 | L55 | L452 | Hydrophobic | Hydrophobic | 0.96 | View |
A-C | A-C | Y101 | F490 | Y101 | F490 | Hydrophobic | Hydrophobic | 0.39 | View |
A-C | A-C | L55 | L452 | L55 | L452 | Hydrophobic | Hydrophobic | 0.67 | View |
A-C | A-C | E102 | S494 | E102 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
A-C | A-C | Y110 | G485 | Y110 | G485 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
A-C | A-C | I57 | T470 | I57 | T470 | Hydrophobic | Hydrophobic | 0.74 | View |
A-C | A-C | A103 | L455 | A103 | L455 | Hydrophobic | Hydrophobic | 0.35 | View |
A-C | A-C | I52 | F490 | I52 | F490 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | Y110 | C488 | Y110 | C488 | Hydrogen Bonds | Hydrogen Bonds | 0.81 | View |
A-C | A-C | E102 | S494 | E102 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-C | A-C | Y110 | E484 | Y110 | K484 | Hydrophobic | Hydrophobic | 0.62 | View |
A-C | A-C | N31 | Y449 | N31 | Y449 | Hydrophobic | Hydrophobic | 0.38 | View |
A-C | A-C | L55 | F490 | L55 | F490 | Hydrophobic | Hydrophobic | 0.74 | View |
A-C | A-C | N59 | G482 | N59 | G482 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-C | A-C | Y110 | E484 | Y110 | K484 | Hydrophobic | Hydrophobic | 1.34 | View |
A-C | A-C | I57 | F490 | I57 | F490 | Hydrophobic | Hydrophobic | 0.35 | View |
A-C | A-C | A103 | F456 | A103 | F456 | Hydrophobic | Hydrophobic | 0.34 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KMG | A-C | R50 | E484 | Attractive, Hydrogen Bonds | 3.34 | View |
7KMG | A-C | R50 | E484 | Attractive, Hydrogen Bonds | 2.70 | View |
7KMG | A-C | R50 | E484 | Attractive | 3.36 | View |
7KMG | A-C | R50 | E484 | Attractive | 3.56 | View |
7KMG | A-C | R50 | E484 | Attractive | 4.63 | View |
7KMG | A-C | R50 | E484 | Attractive | 4.83 | View |
7KMG | A-C | R50 | E484 | Attractive, Hydrogen Bonds | 2.54 | View |
7KMG | A-C | R50 | E484 | Attractive, Hydrogen Bonds | 3.56 | View |
7KMG | A-C | L55 | L452 | Hydrophobic | 4.37 | View |
7KMG | A-C | Y101 | E484 | Hydrophobic | 4.34 | View |
7KMG_africa_mut | A-C | I54 | L452 | Hydrophobic | 4.45 | View |
7KMG_africa_mut | A-C | I54 | L452 | Hydrophobic | 3.97 | View |
7KMG_africa_mut | A-C | I54 | L452 | Hydrophobic | 3.70 | View |
7KMG_africa_mut | A-C | I54 | L452 | Hydrophobic | 3.90 | View |
7KMG_africa_mut | A-C | L55 | T470 | Hydrophobic | 3.54 | View |
7KMG_africa_mut | A-C | L55 | F490 | Hydrophobic | 3.93 | View |
7KMG_africa_mut | A-C | L55 | F490 | Hydrophobic | 3.74 | View |
7KMG_africa_mut | A-C | L55 | F490 | Hydrophobic | 2.96 | View |
7KMG_africa_mut | A-C | L55 | L492 | Hydrophobic | 4.29 | View |
7KMG_africa_mut | A-C | Y101 | K484 | Hydrogen Bonds | 3.84 | View |
7KMG_africa_mut | A-C | E102 | Q493 | Hydrophobic | 4.32 | View |
7KMG_africa_mut | A-C | E102 | Q493 | Hydrophobic | 4.23 | View |
7KMG_africa_mut | A-C | Y110 | K484 | Hydrophobic | 4.14 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |