Execution time: 10.0 seconds
Match RMSD = 0.33
VTR = 0.01
Average AVD = 0.31 Å
Chains(7KLH.pdb ): A versus L
Chains(7KLH_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KLH | 1269 | 10 | 17 | 17 | 0 | 3 | 2 | 49 |
B7KLH_africa_mut | 1269 | 13 | 15 | 16 | 0 | 3 | 3 | 50 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.22 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.23 | View |
L-A | L-A | Y55 | Y505 | Y55 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.36 | View |
L-A | L-A | S36 | Y421 | S36 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.23 | View |
L-A | L-A | S37 | Y421 | S37 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.22 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.19 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.33 | View |
L-A | L-A | Y114 | N487 | Y114 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
L-A | L-A | D66 | E406 | D66 | E406 | Repulsive | Repulsive | 0.5 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.27 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.5 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.2 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.2 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.41 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.34 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Aromatic Stacking | Aromatic Stacking | 0.13 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.3 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.37 | View |
L-A | L-A | Y114 | N487 | Y114 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.13 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.23 | View |
L-A | L-A | R80 | Y421 | R80 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.29 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.19 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.45 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.12 | View |
L-A | L-A | S107 | Y489 | S107 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
L-A | L-A | R80 | D420 | R80 | D420 | Attractive | Attractive | 0.45 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.43 | View |
L-A | L-A | L67 | Y505 | L67 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
L-A | L-A | Y114 | F486 | Y114 | F486 | Hydrophobic | Hydrophobic | 0.2 | View |
L-A | L-A | S37 | Y421 | S37 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
L-A | L-A | H108 | K458 | H108 | K458 | Repulsive | Repulsive | 0.53 | View |
L-A | L-A | R80 | N460 | R80 | N460 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
L-A | L-A | H108 | Y489 | H108 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
L-A | L-A | D66 | E406 | D66 | E406 | Repulsive | Repulsive | 0.34 | View |
L-A | L-A | H108 | Y473 | H108 | Y473 | Aromatic Stacking | Aromatic Stacking | 0.26 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive | Attractive | 0.39 | View |
L-A | L-A | D66 | R403 | D66 | R403 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.34 | View |
L-A | L-A | T109 | A475 | T109 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
L-A | L-A | H108 | Y473 | H108 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KLH | L-A | D66 | K417 | Attractive | 4.37 | View |
7KLH | L-A | D66 | K417 | Attractive, Hydrogen Bonds | 2.77 | View |
7KLH_africa_mut | L-A | H108 | Y473 | Aromatic Stacking | 5.41 | View |
7KLH_africa_mut | L-A | Y114 | F486 | Hydrophobic | 4.47 | View |
7KLH_africa_mut | L-A | Y114 | F486 | Hydrophobic | 4.27 | View |
7KLH_africa_mut | L-A | Y114 | F486 | Hydrophobic | 4.23 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |