VTR
4 main matches found
(8 matches in total )Execution time: 22.0 seconds
Match RMSD = 0.46
VTR = 0.0
Average AVD = 0.46 Å
Parameters
Chains(7KKL.pdb ): A versus F
Chains(7KKL_africa_mut.pdb ) A versus F
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7KKL | 3360 | 4 | 0 | 4 | 0 | 0 | 0 | 8 |
| B7KKL_africa_mut | 3351 | 4 | 0 | 4 | 0 | 0 | 0 | 8 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-F | A-F | N440 | Q39 | N440 | Q39 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
| A-F | A-F | V503 | Y108 | V503 | Y108 | Hydrophobic | Hydrophobic | 0.57 | View |
| A-F | A-F | A372 | A104 | A372 | A104 | Hydrophobic | Hydrophobic | 0.45 | View |
| A-F | A-F | V503 | Y108 | V503 | Y108 | Hydrophobic | Hydrophobic | 0.46 | View |
| A-F | A-F | P499 | Q111 | P499 | Q111 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
| A-F | A-F | A372 | S102 | A372 | S102 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
| A-F | A-F | V503 | Y108 | V503 | Y108 | Hydrophobic | Hydrophobic | 0.52 | View |
| A-F | A-F | A372 | A104 | A372 | A104 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |