Execution time: 11.0 seconds
Match RMSD = 0.63
VTR = 0.02
Average AVD = 0.56 Å
Chains(7KFW.pdb ): A versus H
Chains(7KFW_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KFW | 1869 | 20 | 2 | 25 | 0 | 0 | 1 | 48 |
B7KFW_africa_mut | 1869 | 20 | 0 | 25 | 0 | 0 | 1 | 46 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-H | A-H | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
A-H | A-H | K417 | Y52 | N417 | Y52 | Hydrophobic | Hydrophobic | 1.08 | View |
A-H | A-H | G476 | T28 | G476 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
A-H | A-H | F486 | Y102 | F486 | Y102 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | Y489 | R94 | Y489 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | L455 | Y100 | L455 | Y100 | Hydrophobic | Hydrophobic | 1.23 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | R408 | Y58 | R408 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | F486 | Y102 | F486 | Y102 | Hydrophobic | Hydrophobic | 0.78 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | F456 | Y100 | F456 | Y100 | Aromatic Stacking | 1.02 | View | |
A-H | A-H | Y421 | Y52 | Y421 | Y52 | Hydrophobic | Hydrophobic | 0.69 | View |
A-H | A-H | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-H | A-H | N487 | G26 | N487 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-H | A-H | F456 | Y100 | F456 | Y100 | Hydrophobic | Hydrophobic | 0.5 | View |
A-H | A-H | Y473 | S31 | Y473 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
A-H | A-H | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
A-H | A-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-H | A-H | L455 | Y33 | L455 | Y33 | Hydrophobic | Hydrophobic | 0.4 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.64 | View |
A-H | A-H | Y473 | S53 | Y473 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.88 | View |
A-H | A-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.9 | View |
A-H | A-H | Y489 | R94 | Y489 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | F456 | Y100 | F456 | Y100 | Hydrophobic | Hydrophobic | 0.52 | View |
A-H | A-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
A-H | A-H | D420 | T56 | D420 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-H | A-H | G416 | Y58 | G416 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
A-H | A-H | L455 | Y100 | L455 | Y100 | Hydrophobic | Hydrophobic | 1.23 | View |
A-H | A-H | L455 | Y100 | L455 | Y100 | Hydrophobic | Hydrophobic | 0.69 | View |
A-H | A-H | N487 | R94 | N487 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
A-H | A-H | N487 | R94 | N487 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-H | A-H | Y489 | R94 | Y489 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | L455 | Y100 | L455 | Y100 | Hydrophobic | Hydrophobic | 1.15 | View |
A-H | A-H | D420 | T56 | D420 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
A-H | A-H | L455 | Y33 | L455 | Y33 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | A475 | N32 | A475 | N32 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | Y421 | Y52 | Y421 | Y52 | Hydrophobic | Hydrophobic | 0.63 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KFW | A-H | K417 | Y52 | Hydrogen Bonds | 2.90 | View |
7KFW | A-H | K417 | D96 | Attractive | 4.59 | View |
7KFW | A-H | K417 | D96 | Attractive, Hydrogen Bonds | 2.69 | View |
7KFW | A-H | K417 | S98 | Hydrogen Bonds | 2.79 | View |
7KFW | A-H | Y453 | G99 | Hydrogen Bonds | 2.52 | View |
7KFW_africa_mut | A-H | T415 | Y58 | Hydrogen Bonds | 3.63 | View |
7KFW_africa_mut | A-H | N417 | Y33 | Hydrogen Bonds | 3.13 | View |
7KFW_africa_mut | A-H | F456 | Y33 | Aromatic Stacking | 5.99 | View |
7KFW_africa_mut | A-H | A475 | T28 | Hydrogen Bonds | 3.27 | View |
7KFW_africa_mut | A-H | A475 | S31 | Hydrogen Bonds | 3.72 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |