Execution time: 10.0 seconds
Match RMSD = 0.8
VTR = 0.04
Average AVD = 0.75 Å
Chains(7KFV.pdb ): B versus D
Chains(7KFV_africa_mut.pdb ) B versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7KFV | 1875 | 17 | 0 | 15 | 0 | 0 | 0 | 32 |
B7KFV_africa_mut | 1875 | 22 | 0 | 16 | 0 | 0 | 0 | 38 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-D | B-D | Y453 | Y32 | Y453 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.84 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.79 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.68 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 1.01 | View |
B-D | B-D | R403 | I92 | R403 | I92 | Hydrogen Bonds | Hydrogen Bonds | 1.08 | View |
B-D | B-D | S494 | Y32 | S494 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.91 | View |
B-D | B-D | R403 | I92 | R403 | I92 | Hydrogen Bonds | Hydrogen Bonds | 1.21 | View |
B-D | B-D | Q498 | S67 | Q498 | S67 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.62 | View |
B-D | B-D | Y505 | I29 | Y505 | I29 | Hydrophobic | Hydrophobic | 0.94 | View |
B-D | B-D | Q498 | S30 | Q498 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.88 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.74 | View |
B-D | B-D | Q498 | G68 | Q498 | G68 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.99 | View |
B-D | B-D | Y505 | I2 | Y505 | I2 | Hydrophobic | Hydrophobic | 0.71 | View |
B-D | B-D | Y495 | Y32 | Y495 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 1.09 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.97 | View |
B-D | B-D | G502 | G28 | G502 | G28 | Hydrogen Bonds | Hydrogen Bonds | 1.25 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.8 | View |
B-D | B-D | Y505 | I2 | Y505 | I2 | Hydrophobic | Hydrophobic | 0.56 | View |
B-D | B-D | Y505 | S93 | Y505 | S93 | Hydrogen Bonds | Hydrogen Bonds | 1.2 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.84 | View |
B-D | B-D | Q498 | S67 | Q498 | S67 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
B-D | B-D | G496 | S30 | G496 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
B-D | B-D | Y505 | I92 | Y505 | I92 | Hydrophobic | Hydrophobic | 0.9 | View |
B-D | B-D | T500 | G28 | T500 | G28 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7KFV | B-D | K417 | Y94 | Hydrogen Bonds | 3.82 | View |
7KFV | B-D | N501 | S30 | Hydrogen Bonds | 3.54 | View |
7KFV_africa_mut | B-D | Y501 | Q27 | Hydrophobic | 3.96 | View |
7KFV_africa_mut | B-D | Y501 | Q27 | Hydrophobic | 3.31 | View |
7KFV_africa_mut | B-D | Y501 | Q27 | Hydrophobic | 4.23 | View |
7KFV_africa_mut | B-D | Y501 | Q27 | Hydrogen Bonds | 2.57 | View |
7KFV_africa_mut | B-D | Y501 | Q27 | Hydrogen Bonds | 3.79 | View |
7KFV_africa_mut | B-D | Y501 | G28 | Hydrogen Bonds | 3.61 | View |
7KFV_africa_mut | B-D | Y505 | I92 | Hydrophobic | 3.71 | View |
7KFV_africa_mut | B-D | Y505 | I92 | Hydrophobic | 4.41 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |