Execution time: 34.0 seconds
Match RMSD = 0.61
VTR = 0.03
Average AVD = 0.54 Å
Chains(7K8Y.pdb ): B versus G
Chains(7K8Y_africa_mut.pdb ) B versus G
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8Y | 3238 | 34 | 0 | 9 | 0 | 0 | 1 | 44 |
B7K8Y_africa_mut | 3229 | 45 | 0 | 8 | 0 | 0 | 1 | 54 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-G | B-G | Y489 | L107 | Y489 | L107 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.39 | View |
B-G | B-G | A475 | L107 | A475 | L107 | Hydrophobic | Hydrophobic | 0.59 | View |
B-G | B-G | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.44 | View |
B-G | B-G | Y449 | T28 | Y449 | T28 | Hydrophobic | Hydrophobic | 0.6 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.44 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.35 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.51 | View |
B-G | B-G | Y489 | L107 | Y489 | L107 | Hydrophobic | Hydrophobic | 0.93 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.42 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.33 | View |
B-G | B-G | Y489 | L107 | Y489 | L107 | Hydrophobic | Hydrophobic | 1.89 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.43 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.55 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.29 | View |
B-G | B-G | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.45 | View |
B-G | B-G | Q498 | Y27 | Q498 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
B-G | B-G | F456 | V106 | F456 | V106 | Hydrophobic | Hydrophobic | 0.67 | View |
B-G | B-G | F456 | V106 | F456 | V106 | Hydrophobic | Hydrophobic | 0.91 | View |
B-G | B-G | F456 | V106 | F456 | V106 | Hydrophobic | Hydrophobic | 0.83 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.46 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.45 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.22 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.37 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.51 | View |
B-G | B-G | F456 | V106 | F456 | V106 | Hydrophobic | Hydrophobic | 0.89 | View |
B-G | B-G | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-G | B-G | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.4 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.26 | View |
B-G | B-G | F456 | V106 | F456 | V106 | Hydrophobic | Hydrophobic | 1.02 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.39 | View |
B-G | B-G | Y489 | V106 | Y489 | V106 | Hydrogen Bonds | Hydrogen Bonds | 0.96 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.43 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Aromatic Stacking | Aromatic Stacking | 0.32 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.33 | View |
B-G | B-G | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
B-G | B-G | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.49 | View |
B-G | B-G | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.53 | View |
B-G | B-G | F486 | Y113 | F486 | Y113 | Hydrophobic | Hydrophobic | 0.27 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7K8Y | B-G | E484 | Y33 | Hydrogen Bonds | 2.79 | View |
7K8Y | B-G | E484 | Y33 | Hydrogen Bonds | 3.73 | View |
7K8Y | B-G | E484 | T58 | Hydrogen Bonds | 3.85 | View |
7K8Y | B-G | F486 | L107 | Hydrophobic | 4.49 | View |
7K8Y_africa_mut | B-G | Y449 | F29 | Hydrophobic | 4.32 | View |
7K8Y_africa_mut | B-G | F456 | V106 | Hydrophobic | 4.40 | View |
7K8Y_africa_mut | B-G | F456 | V106 | Hydrophobic | 3.69 | View |
7K8Y_africa_mut | B-G | K484 | Y33 | Hydrogen Bonds | 3.24 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrogen Bonds | 3.71 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrophobic | 4.26 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrophobic | 4.49 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrophobic | 3.96 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrophobic | 4.36 | View |
7K8Y_africa_mut | B-G | F486 | Y113 | Hydrophobic | 3.80 | View |
7K8Y_africa_mut | B-G | Y489 | V106 | Hydrophobic | 4.20 | View |
7K8Y_africa_mut | B-G | Y489 | V106 | Hydrophobic | 3.60 | View |
7K8Y_africa_mut | B-G | Y489 | V106 | Hydrophobic | 4.34 | View |
7K8Y_africa_mut | B-G | Y489 | V106 | Hydrophobic | 3.37 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |