Execution time: 28.0 seconds
Match RMSD = 0.62
VTR = 0.02
Average AVD = 0.55 Å
Chains(7K8W.pdb ): G versus N
Chains(7K8W_africa_mut.pdb ) G versus N
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8W | 3365 | 8 | 0 | 1 | 0 | 0 | 0 | 9 |
B7K8W_africa_mut | 3362 | 9 | 0 | 2 | 0 | 0 | 0 | 11 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
G-N | G-N | V445 | Y33 | V445 | Y33 | Hydrophobic | Hydrophobic | 1.35 | View |
G-N | G-N | K444 | S58 | K444 | S58 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
G-N | G-N | V445 | I50 | V445 | I50 | Hydrophobic | Hydrophobic | 0.35 | View |
G-N | G-N | V445 | I50 | V445 | I50 | Hydrophobic | Hydrophobic | 0.53 | View |
G-N | G-N | V445 | I50 | V445 | I50 | Hydrophobic | Hydrophobic | 0.3 | View |
G-N | G-N | V445 | Y33 | V445 | Y33 | Hydrophobic | Hydrophobic | 0.51 | View |
G-N | G-N | V445 | I50 | V445 | I50 | Hydrophobic | Hydrophobic | 0.55 | View |
G-N | G-N | V445 | I50 | V445 | I50 | Hydrophobic | Hydrophobic | 0.33 | View |
G-N | G-N | V445 | N52 | V445 | N52 | Hydrophobic | Hydrophobic | 0.57 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |