Execution time: 26.0 seconds
Match RMSD = 0.64
VTR = 0.04
Average AVD = 0.6 Å
Chains(7K8W.pdb ): A versus L
Chains(7K8W_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8W | 3365 | 1 | 0 | 8 | 0 | 0 | 0 | 9 |
B7K8W_africa_mut | 3362 | 5 | 0 | 7 | 0 | 1 | 1 | 14 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | N450 | S92 | N450 | S92 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
A-L | A-L | N450 | Y90 | N450 | Y90 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-L | A-L | N450 | Y29 | N450 | Y29 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-L | A-L | N450 | Y29 | N450 | Y29 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-L | A-L | Q493 | K30 | Q493 | K30 | Hydrogen Bonds | Hydrogen Bonds | 0.94 | View |
A-L | A-L | N450 | S92 | N450 | S92 | Hydrogen Bonds | Hydrogen Bonds | 0.91 | View |
A-L | A-L | Y449 | Y90 | Y449 | Y90 | Hydrophobic | Hydrophobic | 0.5 | View |
A-L | A-L | Y449 | Y90 | Y449 | Y90 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7K8W | A-L | Y449 | Y29 | Hydrogen Bonds | 3.65 | View |
7K8W_africa_mut | A-L | Y449 | Y90 | Hydrophobic | 4.17 | View |
7K8W_africa_mut | A-L | Y449 | Y90 | Hydrophobic | 4.00 | View |
7K8W_africa_mut | A-L | Y449 | Y90 | Aromatic Stacking | 5.59 | View |
7K8W_africa_mut | A-L | Y449 | Y90 | Hydrophobic | 4.23 | View |
7K8W_africa_mut | A-L | L452 | Y29 | Hydrophobic | 4.25 | View |
7K8W_africa_mut | A-L | K484 | K30 | Repulsive | 3.72 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |