Execution time: 29.0 seconds
Match RMSD = 0.76
VTR = 0.05
Average AVD = 0.73 Å
Chains(7K8T.pdb ): C versus H
Chains(7K8T_africa_mut.pdb ) C versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8T | 3666 | 21 | 0 | 5 | 0 | 0 | 0 | 26 |
B7K8T_africa_mut | 3657 | 32 | 0 | 6 | 0 | 0 | 0 | 38 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-H | C-H | F490 | R97 | F490 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.7 | View |
C-H | C-H | Y449 | V2 | Y449 | V2 | Hydrophobic | Hydrophobic | 0.61 | View |
C-H | C-H | N481 | N56 | N481 | N56 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 0.72 | View |
C-H | C-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.51 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 1.06 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 0.85 | View |
C-H | C-H | Y449 | V2 | Y449 | V2 | Hydrophobic | Hydrophobic | 0.68 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 0.91 | View |
C-H | C-H | L492 | I31 | L492 | I31 | Hydrophobic | Hydrophobic | 0.63 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 0.9 | View |
C-H | C-H | Y449 | F27 | Y449 | F27 | Hydrophobic | Hydrophobic | 0.45 | View |
C-H | C-H | F490 | R97 | F490 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.36 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 0.86 | View |
C-H | C-H | Y489 | R97 | Y489 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.82 | View |
C-H | C-H | Q493 | R97 | Q493 | R97 | Hydrophobic | Hydrophobic | 0.82 | View |
C-H | C-H | T470 | I31 | T470 | I31 | Hydrophobic | Hydrophobic | 0.58 | View |
C-H | C-H | L452 | T28 | L452 | T28 | Hydrophobic | Hydrophobic | 0.37 | View |
C-H | C-H | F490 | I31 | F490 | I31 | Hydrophobic | Hydrophobic | 1.07 | View |
C-H | C-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.45 | View |
C-H | C-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.65 | View |
C-H | C-H | L492 | I31 | L492 | I31 | Hydrophobic | Hydrophobic | 0.63 | View |
C-H | C-H | L492 | I31 | L492 | I31 | Hydrophobic | Hydrophobic | 0.61 | View |
C-H | C-H | V483 | Y58 | V483 | Y58 | Hydrophobic | Hydrophobic | 0.99 | View |
C-H | C-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.59 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7K8T | C-H | Q493 | R97 | Hydrogen Bonds | 3.47 | View |
7K8T_africa_mut | C-H | Y449 | V2 | Hydrophobic | 4.24 | View |
7K8T_africa_mut | C-H | Y449 | F27 | Hydrophobic | 4.09 | View |
7K8T_africa_mut | C-H | N481 | N56 | Hydrogen Bonds | 3.11 | View |
7K8T_africa_mut | C-H | V483 | V50 | Hydrophobic | 4.10 | View |
7K8T_africa_mut | C-H | V483 | V50 | Hydrophobic | 4.46 | View |
7K8T_africa_mut | C-H | V483 | Y58 | Hydrophobic | 4.40 | View |
7K8T_africa_mut | C-H | V483 | Y58 | Hydrophobic | 4.32 | View |
7K8T_africa_mut | C-H | V483 | Y58 | Hydrophobic | 4.28 | View |
7K8T_africa_mut | C-H | V483 | Y58 | Hydrophobic | 3.56 | View |
7K8T_africa_mut | C-H | V483 | Y58 | Hydrophobic | 3.53 | View |
7K8T_africa_mut | C-H | F490 | I31 | Hydrophobic | 3.69 | View |
7K8T_africa_mut | C-H | F490 | I31 | Hydrophobic | 2.95 | View |
7K8T_africa_mut | C-H | S494 | Y32 | Hydrogen Bonds | 3.69 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |