VTR
8 main matches found
(9 matches in total )Execution time: 27.0 seconds
Match RMSD = 0.41
VTR = 0.01
Average AVD = 0.39 Å
Parameters
Chains(7K8T.pdb ): B versus L
Chains(7K8T_africa_mut.pdb ) B versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7K8T | 3666 | 1 | 3 | 5 | 0 | 0 | 0 | 9 |
| B7K8T_africa_mut | 3657 | 1 | 3 | 7 | 0 | 1 | 0 | 12 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| B-L | B-L | T376 | S67 | T376 | S67 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
| B-L | B-L | V503 | R24 | V503 | R24 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
| B-L | B-L | D405 | R24 | D405 | R24 | Attractive | Attractive | 0.55 | View |
| B-L | B-L | S375 | T69 | S375 | T69 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
| B-L | B-L | D405 | R24 | D405 | R24 | Attractive | Attractive | 0.53 | View |
| B-L | B-L | R408 | T72 | R408 | T72 | Hydrophobic | Hydrophobic | 0.36 | View |
| B-L | B-L | R408 | T20 | R408 | T20 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
| B-L | B-L | K378 | S67 | K378 | S67 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
| B-L | B-L | D405 | R24 | D405 | R24 | Attractive | Attractive | 0.47 | View |