Execution time: 27.0 seconds
Match RMSD = 0.95
VTR = 0.07
Average AVD = 0.86 Å
Chains(7K8S.pdb ): B versus P
Chains(7K8S_africa_mut.pdb ) B versus P
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8S | 3675 | 7 | 8 | 8 | 0 | 0 | 1 | 24 |
B7K8S_africa_mut | 3666 | 7 | 0 | 6 | 0 | 4 | 1 | 18 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-P | B-P | F486 | Y92 | F486 | Y92 | Aromatic Stacking | Aromatic Stacking | 0.59 | View |
B-P | B-P | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.7 | View |
B-P | B-P | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.69 | View |
B-P | B-P | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.54 | View |
B-P | B-P | E484 | R96 | K484 | R96 | Attractive Hydrogen Bonds | Repulsive | 1.43 | View |
B-P | B-P | G485 | Y32 | G485 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
B-P | B-P | E484 | R96 | K484 | R96 | Attractive Hydrogen Bonds | Repulsive | 1.72 | View |
B-P | B-P | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.62 | View |
B-P | B-P | E484 | R96 | K484 | R96 | Attractive | Repulsive | 0.94 | View |
B-P | B-P | E484 | R96 | K484 | T94 | Attractive | Hydrogen Bonds | 1.72 | View |
B-P | B-P | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.61 | View |
B-P | B-P | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.63 | View |
B-P | B-P | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.53 | View |
B-P | B-P | F486 | Y32 | F486 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7K8S | B-P | E484 | T94 | Hydrogen Bonds | 2.62 | View |
7K8S | B-P | E484 | R96 | Hydrogen Bonds | 3.74 | View |
7K8S | B-P | E484 | R96 | Attractive | 4.79 | View |
7K8S | B-P | E484 | R96 | Attractive, Hydrogen Bonds | 3.68 | View |
7K8S | B-P | E484 | R96 | Attractive | 4.45 | View |
7K8S | B-P | E484 | R96 | Attractive, Hydrogen Bonds | 3.26 | View |
7K8S_africa_mut | B-P | K484 | S91 | Hydrogen Bonds | 2.73 | View |
7K8S_africa_mut | B-P | K484 | Y92 | Hydrogen Bonds | 3.41 | View |
7K8S_africa_mut | B-P | K484 | R96 | Repulsive | 2.83 | View |
7K8S_africa_mut | B-P | K484 | R96 | Hydrogen Bonds | 3.04 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |