Execution time: 11.0 seconds
Match RMSD = 0.46
VTR = 0.02
Average AVD = 0.42 Å
Chains(7K8M.pdb ): E versus A
Chains(7K8M_africa_mut.pdb ) E versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7K8M | 607 | 33 | 2 | 21 | 0 | 0 | 4 | 60 |
B7K8M_africa_mut | 607 | 43 | 0 | 23 | 0 | 0 | 4 | 70 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.31 | View |
A-E | A-E | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-E | A-E | Y102 | F486 | Y102 | F486 | Hydrophobic | Hydrophobic | 0.38 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.26 | View |
A-E | A-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.43 | View |
A-E | A-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.5 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Aromatic Stacking | Aromatic Stacking | 0.29 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.35 | View |
A-E | A-E | Y96 | L455 | Y96 | L455 | Hydrophobic | Hydrophobic | 0.57 | View |
A-E | A-E | S53 | R457 | S53 | R457 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
A-E | A-E | I28 | A475 | I28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
A-E | A-E | Y99 | Y453 | Y99 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.3 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.29 | View |
A-E | A-E | S30 | K458 | S30 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.74 | View |
A-E | A-E | R94 | Y489 | R94 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
A-E | A-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.54 | View |
A-E | A-E | R94 | N487 | R94 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.34 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.48 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.29 | View |
A-E | A-E | Y102 | F486 | Y102 | F486 | Aromatic Stacking | Aromatic Stacking | 0.62 | View |
A-E | A-E | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.32 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.26 | View |
A-E | A-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.35 | View |
A-E | A-E | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-E | A-E | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-E | A-E | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
A-E | A-E | Y33 | F456 | Y33 | F456 | Aromatic Stacking | Aromatic Stacking | 0.34 | View |
A-E | A-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.34 | View |
A-E | A-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.47 | View |
A-E | A-E | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
A-E | A-E | G26 | N487 | G26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-E | A-E | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.49 | View |
A-E | A-E | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.24 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.32 | View |
A-E | A-E | Y52 | K417 | Y52 | N417 | Hydrophobic | Hydrophobic | 1.27 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.25 | View |
A-E | A-E | Y102 | F486 | Y102 | F486 | Hydrophobic | Hydrophobic | 0.47 | View |
A-E | A-E | Y102 | F486 | Y102 | F486 | Hydrophobic | Hydrophobic | 0.46 | View |
A-E | A-E | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-E | A-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.35 | View |
A-E | A-E | Y102 | F486 | Y102 | F486 | Hydrophobic | Hydrophobic | 0.73 | View |
A-E | A-E | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-E | A-E | Y96 | F456 | Y96 | F456 | Hydrophobic | Hydrophobic | 0.33 | View |
A-E | A-E | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.36 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.32 | View |
A-E | A-E | S31 | K458 | S31 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
A-E | A-E | G26 | S477 | G26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
A-E | A-E | Y96 | Y489 | Y96 | Y489 | Hydrophobic | Hydrophobic | 0.46 | View |
A-E | A-E | G26 | S477 | G26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-E | A-E | Y99 | L455 | Y99 | L455 | Hydrophobic | Hydrophobic | 0.78 | View |
A-E | A-E | S53 | Y473 | S53 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7K8M | A-E | G97 | K417 | Hydrogen Bonds | 2.61 | View |
7K8M | A-E | D98 | K417 | Attractive | 5.98 | View |
7K8M | A-E | D98 | K417 | Attractive | 4.60 | View |
7K8M | A-E | Y99 | K417 | Hydrogen Bonds | 3.43 | View |
7K8M_africa_mut | A-E | V2 | F486 | Hydrophobic | 4.42 | View |
7K8M_africa_mut | A-E | F27 | F486 | Hydrophobic | 4.06 | View |
7K8M_africa_mut | A-E | Y33 | N417 | Hydrogen Bonds | 3.18 | View |
7K8M_africa_mut | A-E | Y52 | Y421 | Hydrophobic | 3.98 | View |
7K8M_africa_mut | A-E | G54 | N460 | Hydrogen Bonds | 3.71 | View |
7K8M_africa_mut | A-E | R94 | Y489 | Hydrogen Bonds | 3.88 | View |
7K8M_africa_mut | A-E | Y96 | L455 | Hydrophobic | 4.07 | View |
7K8M_africa_mut | A-E | Y96 | F456 | Hydrophobic | 4.49 | View |
7K8M_africa_mut | A-E | Y96 | F456 | Hydrophobic | 4.48 | View |
7K8M_africa_mut | A-E | Y96 | K484 | Hydrogen Bonds | 3.69 | View |
7K8M_africa_mut | A-E | Y96 | Y489 | Hydrophobic | 4.30 | View |
7K8M_africa_mut | A-E | Y96 | Y489 | Hydrophobic | 4.28 | View |
7K8M_africa_mut | A-E | Y96 | Y489 | Hydrophobic | 4.12 | View |
7K8M_africa_mut | A-E | Y99 | L455 | Hydrophobic | 4.21 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |