Execution time: 92.0 seconds
Match RMSD = 0.44
VTR = 0.01
Average AVD = 0.35 Å
Chains(7JWB.pdb ): B versus D
Chains(7JWB_africa_mut.pdb ) B versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JWB | 3289 | 68 | 23 | 32 | 0 | 1 | 4 | 128 |
B7JWB_africa_mut | 3286 | 80 | 15 | 24 | 0 | 5 | 4 | 128 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
D-B | D-B | W248 | F456 | W248 | F456 | Hydrophobic | Hydrophobic | 0.4 | View |
D-B | D-B | F250 | Y453 | F250 | Y453 | Hydrophobic | Hydrophobic | 0.4 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.47 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive | Attractive | 0.26 | View |
D-B | D-B | D115 | K378 | D115 | K378 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.29 | View |
D-B | D-B | S204 | Q493 | S204 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
D-B | D-B | Y206 | Y449 | Y206 | Y449 | Hydrophobic | Hydrophobic | 0.24 | View |
D-B | D-B | V186 | F486 | V186 | F486 | Hydrophobic | Hydrophobic | 0.18 | View |
D-B | D-B | S178 | Y505 | S178 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.4 | View |
D-B | D-B | Y97 | D405 | Y97 | D405 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
D-B | D-B | E194 | F486 | E194 | F486 | Hydrophobic | Hydrophobic | 0.11 | View |
D-B | D-B | A251 | F456 | A251 | F456 | Hydrophobic | Hydrophobic | 1.0 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.12 | View |
D-B | D-B | Y180 | Y505 | Y180 | Y505 | Hydrophobic | Hydrophobic | 0.36 | View |
D-B | D-B | Y206 | Y449 | Y206 | Y449 | Hydrophobic | Hydrophobic | 0.26 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.33 | View |
D-B | D-B | F250 | Y453 | F250 | Y453 | Hydrophobic | Hydrophobic | 0.48 | View |
D-B | D-B | W248 | F456 | W248 | F456 | Hydrophobic | Hydrophobic | 0.48 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.22 | View |
D-B | D-B | F250 | Y453 | F250 | Y453 | Aromatic Stacking | Aromatic Stacking | 0.34 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive | Attractive | 0.32 | View |
D-B | D-B | W248 | F456 | W248 | F456 | Hydrophobic | Hydrophobic | 0.48 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.1 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive | Attractive | 0.19 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.24 | View |
D-B | D-B | Q3 | T415 | Q3 | T415 | Hydrophobic | Hydrophobic | 0.07 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive | Attractive | 0.17 | View |
D-B | D-B | W248 | F456 | W248 | F456 | Hydrophobic | Hydrophobic | 0.4 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.24 | View |
D-B | D-B | W248 | L455 | W248 | L455 | Hydrophobic | Hydrophobic | 0.29 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive | Attractive | 0.26 | View |
D-B | D-B | W248 | L455 | W248 | L455 | Hydrophobic | Hydrophobic | 0.44 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.11 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.44 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.17 | View |
D-B | D-B | V186 | F486 | V186 | F486 | Hydrophobic | Hydrophobic | 0.19 | View |
D-B | D-B | Y206 | S494 | Y206 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
D-B | D-B | Y97 | R408 | Y97 | R408 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive | Attractive | 0.29 | View |
D-B | D-B | S203 | G496 | S203 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
D-B | D-B | S203 | R403 | S203 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.51 | View |
D-B | D-B | W117 | Q414 | W117 | Q414 | Hydrogen Bonds | Hydrogen Bonds | 0.16 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.22 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive | Attractive | 0.22 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.44 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.15 | View |
D-B | D-B | V186 | F486 | V186 | F486 | Hydrophobic | Hydrophobic | 0.31 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.24 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.49 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.14 | View |
D-B | D-B | F250 | K417 | F250 | N417 | Hydrophobic | Hydrophobic | 1.84 | View |
D-B | D-B | R41 | R408 | R41 | R408 | Repulsive | Repulsive | 0.09 | View |
D-B | D-B | S204 | Q493 | S204 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
D-B | D-B | Y180 | Y505 | Y180 | Y505 | Aromatic Stacking | Aromatic Stacking | 0.22 | View |
D-B | D-B | Q3 | T415 | Q3 | T415 | Hydrophobic | Hydrophobic | 0.12 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.24 | View |
D-B | D-B | A251 | F456 | A251 | F456 | Hydrophobic | Hydrophobic | 0.67 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.49 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.54 | View |
D-B | D-B | V186 | F486 | V186 | F486 | Hydrophobic | Hydrophobic | 0.29 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.22 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.44 | View |
D-B | D-B | Q119 | T415 | Q119 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive | Attractive | 0.29 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.18 | View |
D-B | D-B | L261 | F486 | L261 | F486 | Hydrophobic | Hydrophobic | 0.24 | View |
D-B | D-B | W264 | F486 | W264 | F486 | Hydrophobic | Hydrophobic | 0.12 | View |
D-B | D-B | Q119 | T415 | Q119 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.11 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.24 | View |
D-B | D-B | Y180 | Y505 | Y180 | Y505 | Hydrophobic | Hydrophobic | 0.39 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.49 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.47 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.35 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive | Attractive | 0.29 | View |
D-B | D-B | G257 | Y473 | G257 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
D-B | D-B | W117 | Q414 | W117 | Q414 | Hydrogen Bonds | Hydrogen Bonds | 0.07 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.48 | View |
D-B | D-B | F250 | Y453 | F250 | Y453 | Hydrophobic | Hydrophobic | 0.43 | View |
D-B | D-B | E194 | F486 | E194 | F486 | Hydrophobic | Hydrophobic | 0.25 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
D-B | D-B | G257 | Y421 | G257 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 1.32 | View |
D-B | D-B | Y180 | R403 | Y180 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
D-B | D-B | Q119 | Q409 | Q119 | Q409 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
D-B | D-B | Y177 | G496 | Y177 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
D-B | D-B | L196 | F486 | L196 | F486 | Hydrophobic | Hydrophobic | 0.16 | View |
D-B | D-B | Y177 | Q498 | Y177 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
D-B | D-B | Y180 | Y505 | Y180 | Y505 | Hydrophobic | Hydrophobic | 0.18 | View |
D-B | D-B | F250 | K417 | F250 | N417 | Hydrophobic | Hydrophobic | 0.65 | View |
D-B | D-B | V186 | F486 | V186 | F486 | Hydrophobic | Hydrophobic | 0.19 | View |
D-B | D-B | L261 | F486 | L261 | F486 | Hydrophobic | Hydrophobic | 0.23 | View |
D-B | D-B | R41 | D405 | R41 | D405 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.29 | View |
D-B | D-B | D115 | K378 | D115 | K378 | Attractive | Attractive | 0.32 | View |
D-B | D-B | E47 | R408 | E47 | R408 | Attractive | Attractive | 0.17 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.33 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.36 | View |
D-B | D-B | Y206 | Y449 | Y206 | Y449 | Aromatic Stacking | Aromatic Stacking | 0.16 | View |
D-B | D-B | F250 | K417 | F250 | N417 | Hydrophobic | Hydrophobic | 1.6 | View |
D-B | D-B | Y206 | Y449 | Y206 | Y449 | Hydrophobic | Hydrophobic | 0.21 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.22 | View |
D-B | D-B | F250 | L455 | F250 | L455 | Hydrophobic | Hydrophobic | 0.45 | View |
D-B | D-B | W248 | Y489 | W248 | Y489 | Hydrophobic | Hydrophobic | 0.19 | View |
D-B | D-B | W248 | L455 | W248 | L455 | Hydrophobic | Hydrophobic | 0.33 | View |
D-B | D-B | Q3 | T415 | Q3 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.14 | View |
D-B | D-B | F250 | Y453 | F250 | Y453 | Hydrophobic | Hydrophobic | 0.45 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7JWB | D-B | Y177 | N501 | Hydrogen Bonds | 2.82 | View |
7JWB | D-B | Y177 | N501 | Hydrogen Bonds | 3.89 | View |
7JWB | D-B | R199 | E484 | Attractive | 5.03 | View |
7JWB | D-B | R199 | E484 | Attractive | 5.28 | View |
7JWB | D-B | R199 | E484 | Attractive | 3.76 | View |
7JWB | D-B | R199 | E484 | Attractive | 3.94 | View |
7JWB | D-B | R199 | E484 | Attractive, Hydrogen Bonds | 3.81 | View |
7JWB | D-B | R199 | E484 | Attractive, Hydrogen Bonds | 3.29 | View |
7JWB | D-B | R199 | E484 | Attractive, Hydrogen Bonds | 2.84 | View |
7JWB | D-B | R199 | E484 | Attractive, Hydrogen Bonds | 3.69 | View |
7JWB | D-B | F250 | K417 | Hydrophobic | 4.09 | View |
7JWB | D-B | F250 | K417 | Hydrophobic | 3.34 | View |
7JWB | D-B | G257 | R457 | Hydrogen Bonds | 3.42 | View |
7JWB | D-B | G257 | Y473 | Hydrogen Bonds | 3.31 | View |
7JWB_africa_mut | D-B | Y180 | Y505 | Hydrophobic | 4.47 | View |
7JWB_africa_mut | D-B | V186 | F486 | Hydrophobic | 4.44 | View |
7JWB_africa_mut | D-B | L196 | F486 | Hydrophobic | 4.45 | View |
7JWB_africa_mut | D-B | R199 | K484 | Repulsive | 4.65 | View |
7JWB_africa_mut | D-B | R199 | K484 | Repulsive | 4.40 | View |
7JWB_africa_mut | D-B | R199 | K484 | Repulsive | 4.20 | View |
7JWB_africa_mut | D-B | R199 | K484 | Repulsive | 4.99 | View |
7JWB_africa_mut | D-B | Y206 | Y449 | Hydrophobic | 4.31 | View |
7JWB_africa_mut | D-B | W248 | F456 | Hydrophobic | 3.24 | View |
7JWB_africa_mut | D-B | W248 | F456 | Hydrophobic | 3.86 | View |
7JWB_africa_mut | D-B | W248 | Y489 | Hydrophobic | 4.12 | View |
7JWB_africa_mut | D-B | W248 | Y489 | Hydrophobic | 3.64 | View |
7JWB_africa_mut | D-B | F250 | Y453 | Hydrophobic | 4.33 | View |
7JWB_africa_mut | D-B | F250 | Y453 | Hydrophobic | 4.35 | View |
7JWB_africa_mut | D-B | F250 | L455 | Hydrophobic | 4.42 | View |
7JWB_africa_mut | D-B | F250 | L455 | Hydrophobic | 4.31 | View |
7JWB_africa_mut | D-B | F250 | L455 | Hydrophobic | 4.19 | View |
7JWB_africa_mut | D-B | F250 | Q493 | Hydrophobic | 4.42 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |