Execution time: 95.0 seconds
Match RMSD = 0.64
VTR = 0.02
Average AVD = 0.49 Å
Chains(7JWB.pdb ): A versus D
Chains(7JWB_africa_mut.pdb ) A versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JWB | 3289 | 46 | 7 | 24 | 0 | 0 | 5 | 82 |
B7JWB_africa_mut | 3286 | 50 | 0 | 21 | 0 | 4 | 5 | 80 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
D-A | D-A | Y35 | Y453 | Y35 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.11 | View |
D-A | D-A | E47 | F486 | E47 | F486 | Hydrophobic | Hydrophobic | 0.29 | View |
D-A | D-A | Y33 | Y505 | Y33 | Y505 | Hydrophobic | Hydrophobic | 0.32 | View |
D-A | D-A | Y35 | Y489 | Y35 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.25 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 0.57 | View |
D-A | D-A | Y59 | S494 | Y59 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
D-A | D-A | F103 | L455 | F103 | L455 | Hydrophobic | Hydrophobic | 0.43 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 0.67 | View |
D-A | D-A | F103 | L455 | F103 | L455 | Hydrophobic | Hydrophobic | 0.36 | View |
D-A | D-A | Y61 | Q493 | Y61 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 0.63 | View |
D-A | D-A | V39 | F486 | V39 | F486 | Hydrophobic | Hydrophobic | 0.25 | View |
D-A | D-A | Y30 | N501 | Y30 | R403 | Hydrogen Bonds | Hydrogen Bonds | 1.71 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 0.54 | View |
D-A | D-A | Y54 | Y489 | Y54 | Y489 | Hydrophobic | Hydrophobic | 0.35 | View |
D-A | D-A | Y30 | G496 | Y30 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
D-A | D-A | W101 | F456 | W101 | F456 | Hydrophobic | Hydrophobic | 0.31 | View |
D-A | D-A | Y54 | Y489 | Y54 | Y489 | Hydrophobic | Hydrophobic | 0.27 | View |
D-A | D-A | F103 | L455 | F103 | L455 | Hydrophobic | Hydrophobic | 0.31 | View |
D-A | D-A | Y33 | Y505 | Y33 | Y505 | Aromatic Stacking | Aromatic Stacking | 0.2 | View |
D-A | D-A | S56 | R403 | S56 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.15 | View |
D-A | D-A | Y30 | Q498 | Y30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.86 | View |
D-A | D-A | R52 | C488 | R52 | C488 | Hydrogen Bonds | Hydrogen Bonds | 0.86 | View |
D-A | D-A | V39 | F486 | V39 | F486 | Hydrophobic | Hydrophobic | 0.13 | View |
D-A | D-A | F103 | K417 | F103 | N417 | Hydrophobic | Hydrophobic | 1.78 | View |
D-A | D-A | E47 | F486 | E47 | F486 | Hydrophobic | Hydrophobic | 0.16 | View |
D-A | D-A | Y33 | R403 | Y33 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.85 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.26 | View |
D-A | D-A | V39 | F486 | V39 | F486 | Hydrophobic | Hydrophobic | 0.09 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.87 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.17 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 1.03 | View |
D-A | D-A | Y33 | Y505 | Y33 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
D-A | D-A | Y61 | Q493 | Y61 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
D-A | D-A | R52 | C488 | R52 | K484 | Hydrogen Bonds | Repulsive | 1.46 | View |
D-A | D-A | Y54 | Y489 | Y54 | Y489 | Hydrophobic | Hydrophobic | 0.38 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Hydrophobic | Hydrophobic | 0.41 | View |
D-A | D-A | Y33 | Y505 | Y33 | Y505 | Hydrophobic | Hydrophobic | 0.56 | View |
D-A | D-A | Y35 | L455 | Y35 | L455 | Hydrophobic | Hydrophobic | 0.33 | View |
D-A | D-A | Y35 | Y489 | Y35 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.27 | View |
D-A | D-A | S111 | Y473 | S111 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
D-A | D-A | F103 | L455 | F103 | L455 | Hydrophobic | Hydrophobic | 0.37 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.16 | View |
D-A | D-A | Y35 | Y489 | Y35 | Y489 | Hydrophobic | Hydrophobic | 0.55 | View |
D-A | D-A | W101 | F456 | W101 | F456 | Aromatic Stacking | Aromatic Stacking | 0.09 | View |
D-A | D-A | W101 | F456 | W101 | F456 | Hydrophobic | Hydrophobic | 0.19 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.73 | View |
D-A | D-A | S57 | S494 | S57 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
D-A | D-A | Y33 | Y505 | Y33 | Y505 | Hydrophobic | Hydrophobic | 0.45 | View |
D-A | D-A | F103 | L455 | F103 | L455 | Hydrophobic | Hydrophobic | 0.43 | View |
D-A | D-A | V39 | F486 | V39 | F486 | Hydrophobic | Hydrophobic | 0.21 | View |
D-A | D-A | S56 | G496 | S56 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
D-A | D-A | W101 | Y489 | W101 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.24 | View |
D-A | D-A | S57 | Y453 | S57 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
D-A | D-A | L114 | F486 | L114 | F486 | Hydrophobic | Hydrophobic | 0.19 | View |
D-A | D-A | Y35 | Y489 | Y35 | Y489 | Hydrophobic | Hydrophobic | 0.58 | View |
D-A | D-A | L114 | N487 | L114 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.85 | View |
D-A | D-A | Y54 | Y489 | Y54 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.22 | View |
D-A | D-A | L114 | F486 | L114 | F486 | Hydrophobic | Hydrophobic | 0.2 | View |
D-A | D-A | A104 | F456 | A104 | F456 | Hydrophobic | Hydrophobic | 0.74 | View |
D-A | D-A | F103 | K417 | F103 | N417 | Hydrophobic | Hydrophobic | 1.81 | View |
D-A | D-A | Y33 | K417 | Y33 | E406 | Hydrogen Bonds | Hydrogen Bonds | 1.84 | View |
D-A | D-A | S31 | Y505 | S31 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
D-A | D-A | L49 | F486 | L49 | F486 | Hydrophobic | Hydrophobic | 0.12 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7JWB | D-A | Y30 | N501 | Hydrogen Bonds | 2.79 | View |
7JWB | D-A | R52 | E484 | Attractive | 5.14 | View |
7JWB | D-A | R52 | E484 | Attractive | 4.63 | View |
7JWB | D-A | R52 | E484 | Attractive | 5.42 | View |
7JWB | D-A | R52 | E484 | Attractive | 5.52 | View |
7JWB | D-A | R52 | E484 | Attractive | 5.90 | View |
7JWB | D-A | R52 | E484 | Attractive, Hydrogen Bonds | 3.54 | View |
7JWB | D-A | R52 | E484 | Attractive | 4.49 | View |
7JWB | D-A | A104 | L455 | Hydrophobic | 4.41 | View |
7JWB | D-A | G110 | Y421 | Hydrogen Bonds | 3.24 | View |
7JWB | D-A | G110 | R457 | Hydrogen Bonds | 3.03 | View |
7JWB_africa_mut | D-A | Y33 | Y505 | Hydrophobic | 4.30 | View |
7JWB_africa_mut | D-A | L49 | F486 | Hydrophobic | 4.45 | View |
7JWB_africa_mut | D-A | L49 | F486 | Hydrophobic | 4.42 | View |
7JWB_africa_mut | D-A | R52 | K484 | Repulsive | 4.94 | View |
7JWB_africa_mut | D-A | R52 | K484 | Repulsive | 3.69 | View |
7JWB_africa_mut | D-A | R52 | K484 | Repulsive | 3.61 | View |
7JWB_africa_mut | D-A | Y54 | Y489 | Hydrogen Bonds | 3.78 | View |
7JWB_africa_mut | D-A | W101 | A475 | Hydrophobic | 4.38 | View |
7JWB_africa_mut | D-A | G110 | L455 | Hydrogen Bonds | 2.99 | View |
7JWB_africa_mut | D-A | W117 | F486 | Hydrophobic | 4.46 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |