Execution time: 7.0 seconds
Match RMSD = 0.3
VTR = 0.0
Average AVD = 0.28 Å
Chains(7JVA.pdb ): A versus H
Chains(7JVA_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JVA | 420 | 31 | 0 | 7 | 0 | 0 | 1 | 39 |
B7JVA_africa_mut | 420 | 31 | 0 | 9 | 0 | 0 | 1 | 41 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.22 | View |
H-A | H-A | W101 | F377 | W101 | F377 | Hydrophobic | Hydrophobic | 0.18 | View |
H-A | H-A | W100 | T385 | W100 | T385 | Hydrophobic | Hydrophobic | 0.29 | View |
H-A | H-A | W100 | Y369 | W100 | Y369 | Hydrophobic | Hydrophobic | 0.42 | View |
H-A | H-A | W101 | F377 | W101 | F377 | Hydrophobic | Hydrophobic | 0.22 | View |
H-A | H-A | W101 | F377 | W101 | F377 | Hydrophobic | Hydrophobic | 0.2 | View |
H-A | H-A | W100 | Y369 | W100 | Y369 | Hydrophobic | Hydrophobic | 0.34 | View |
H-A | H-A | Q53 | N370 | Q53 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
H-A | H-A | W33 | N370 | W33 | N370 | Hydrophobic | Hydrophobic | 0.25 | View |
H-A | H-A | R103 | F374 | R103 | F374 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
H-A | H-A | W100 | T385 | W100 | T385 | Hydrophobic | Hydrophobic | 0.39 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.19 | View |
H-A | H-A | W33 | N370 | W33 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.25 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.17 | View |
H-A | H-A | W100 | Y369 | W100 | Y369 | Hydrophobic | Hydrophobic | 0.38 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.31 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Aromatic Stacking | Aromatic Stacking | 0.27 | View |
H-A | H-A | W100 | T385 | W100 | T385 | Hydrophobic | Hydrophobic | 0.35 | View |
H-A | H-A | Y59 | A372 | Y59 | A372 | Hydrophobic | Hydrophobic | 0.3 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.18 | View |
H-A | H-A | Y59 | A372 | Y59 | A372 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.2 | View |
H-A | H-A | W100 | Y369 | W100 | Y369 | Hydrophobic | Hydrophobic | 0.42 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.14 | View |
H-A | H-A | R103 | S371 | R103 | S371 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.27 | View |
H-A | H-A | R103 | F374 | R103 | F374 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
H-A | H-A | Y59 | A372 | Y59 | A372 | Hydrophobic | Hydrophobic | 0.32 | View |
H-A | H-A | W101 | T385 | W101 | T385 | Hydrophobic | Hydrophobic | 0.3 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.19 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.2 | View |
H-A | H-A | W101 | Y369 | W101 | Y369 | Hydrophobic | Hydrophobic | 0.23 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.22 | View |
H-A | H-A | R103 | S371 | R103 | S371 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
H-A | H-A | W101 | F377 | W101 | F377 | Hydrophobic | Hydrophobic | 0.2 | View |
H-A | H-A | L102 | A372 | L102 | A372 | Hydrophobic | Hydrophobic | 0.61 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.17 | View |
H-A | H-A | W101 | P384 | W101 | P384 | Hydrophobic | Hydrophobic | 0.18 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |