Execution time: 8.0 seconds
Match RMSD = 0.5
VTR = 0.0
Average AVD = 0.4 Å
Chains(7JMP.pdb ): A versus L
Chains(7JMP_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JMP | 579 | 23 | 0 | 1 | 0 | 0 | 2 | 26 |
B7JMP_africa_mut | 579 | 24 | 0 | 1 | 0 | 0 | 2 | 27 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.27 | View |
A-L | A-L | F486 | L32 | F486 | L32 | Hydrophobic | Hydrophobic | 0.48 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Hydrophobic | Hydrophobic | 0.38 | View |
A-L | A-L | F486 | S95 | F486 | S95 | Hydrogen Bonds | Hydrogen Bonds | 1.88 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.3 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.29 | View |
A-L | A-L | F486 | L32 | F486 | L32 | Hydrophobic | Hydrophobic | 0.45 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Hydrophobic | Hydrophobic | 0.52 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Hydrophobic | Hydrophobic | 0.37 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.26 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.34 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.22 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Aromatic Stacking | Aromatic Stacking | 0.39 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.23 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.32 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.37 | View |
A-L | A-L | F486 | L32 | F486 | L32 | Hydrophobic | Hydrophobic | 0.45 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.28 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.36 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.25 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.29 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Hydrophobic | Hydrophobic | 0.36 | View |
A-L | A-L | F486 | W96 | F486 | W96 | Hydrophobic | Hydrophobic | 0.47 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.21 | View |
A-L | A-L | F486 | Y91 | F486 | Y91 | Hydrophobic | Hydrophobic | 0.33 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7JMP_africa_mut | A-L | F486 | L32 | Hydrophobic | 4.42 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |