Execution time: 11.0 seconds
Match RMSD = 0.57
VTR = 0.03
Average AVD = 0.54 Å
Chains(7JMO.pdb ): A versus L
Chains(7JMO_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7JMO | 616 | 6 | 0 | 10 | 0 | 0 | 1 | 17 |
B7JMO_africa_mut | 616 | 12 | 0 | 11 | 0 | 0 | 1 | 24 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | Y495 | S31 | Y495 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
A-L | A-L | Y505 | S93 | Y505 | S93 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-L | A-L | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 0.48 | View |
A-L | A-L | Y505 | V28 | Y505 | V28 | Hydrophobic | Hydrophobic | 0.62 | View |
A-L | A-L | Y505 | V28 | Y505 | V28 | Hydrophobic | Hydrophobic | 0.98 | View |
A-L | A-L | R403 | Y32 | R403 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-L | A-L | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 0.48 | View |
A-L | A-L | R403 | S93 | R403 | S93 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
A-L | A-L | Y505 | Y32 | Y505 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.49 | View |
A-L | A-L | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 0.53 | View |
A-L | A-L | Y505 | S93 | Y505 | S93 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
A-L | A-L | R403 | G92 | R403 | G92 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
A-L | A-L | G496 | S29 | G496 | S29 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-L | A-L | Y453 | Y32 | Y453 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-L | A-L | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 0.53 | View |
A-L | A-L | R403 | G92 | R403 | G92 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7JMO | A-L | N501 | S29 | Hydrogen Bonds | 3.65 | View |
7JMO_africa_mut | A-L | D405 | S93 | Hydrogen Bonds | 3.77 | View |
7JMO_africa_mut | A-L | Y501 | Q27 | Hydrophobic | 4.33 | View |
7JMO_africa_mut | A-L | Y501 | Q27 | Hydrophobic | 3.19 | View |
7JMO_africa_mut | A-L | Y501 | Q27 | Hydrophobic | 4.06 | View |
7JMO_africa_mut | A-L | Y501 | Q27 | Hydrogen Bonds | 3.57 | View |
7JMO_africa_mut | A-L | Y505 | V28 | Hydrophobic | 4.48 | View |
7JMO_africa_mut | A-L | Y505 | V28 | Hydrophobic | 4.44 | View |
7JMO_africa_mut | A-L | Y505 | Y32 | Hydrophobic | 4.02 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |