Execution time: 35.0 seconds
Match RMSD = 0.44
VTR = 0.01
Average AVD = 0.39 Å
Chains(7DX4.pdb ): E versus A
Chains(7DX4_africa_mut.pdb ) E versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7DX4 | 1027 | 40 | 3 | 18 | 0 | 2 | 1 | 64 |
B7DX4_africa_mut | 1027 | 47 | 1 | 16 | 0 | 3 | 3 | 70 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-E | A-E | L45 | Q498 | L45 | Q498 | Hydrophobic | Hydrophobic | 0.47 | View |
A-E | A-E | K31 | L455 | K31 | L455 | Hydrophobic | Hydrophobic | 0.45 | View |
A-E | A-E | G354 | G502 | G354 | G502 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.29 | View |
A-E | A-E | D30 | F456 | D30 | F456 | Hydrophobic | Hydrophobic | 0.17 | View |
A-E | A-E | R393 | Y505 | R393 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-E | A-E | K353 | G502 | K353 | G502 | Hydrogen Bonds | Hydrogen Bonds | 1.06 | View |
A-E | A-E | D355 | T500 | D355 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.16 | View |
A-E | A-E | T27 | A475 | T27 | A475 | Hydrophobic | Hydrophobic | 0.23 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.49 | View |
A-E | A-E | T27 | Y489 | T27 | Y489 | Hydrophobic | Hydrophobic | 0.23 | View |
A-E | A-E | Y41 | Q498 | Y41 | Q498 | Hydrophobic | Hydrophobic | 0.34 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.32 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.28 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.31 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.22 | View |
A-E | A-E | R357 | T500 | R357 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.11 | View |
A-E | A-E | Y41 | T500 | Y41 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
A-E | A-E | H34 | R403 | H34 | R403 | Repulsive | Repulsive | 0.6 | View |
A-E | A-E | D30 | F456 | D30 | F456 | Hydrophobic | Hydrophobic | 0.2 | View |
A-E | A-E | Y41 | T500 | Y41 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.19 | View |
A-E | A-E | H34 | E406 | H34 | E406 | Attractive | Attractive | 0.88 | View |
A-E | A-E | K353 | G496 | K353 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.25 | View |
A-E | A-E | T27 | Y489 | T27 | Y489 | Hydrophobic | Hydrophobic | 0.24 | View |
A-E | A-E | Q24 | N487 | Q24 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Aromatic Stacking | Aromatic Stacking | 0.3 | View |
A-E | A-E | E35 | Q493 | E35 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.74 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.2 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.2 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.23 | View |
A-E | A-E | Y83 | N487 | Y83 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.56 | View |
A-E | A-E | T27 | Y473 | T27 | Y473 | Hydrophobic | Hydrophobic | 0.29 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.34 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.46 | View |
A-E | A-E | Y41 | N501 | Y41 | Y501 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.37 | View |
A-E | A-E | Y41 | Q498 | Y41 | Q498 | Hydrophobic | Hydrophobic | 0.42 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.33 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.53 | View |
A-E | A-E | K31 | F456 | K31 | F456 | Hydrophobic | Hydrophobic | 0.18 | View |
A-E | A-E | D38 | Y449 | D38 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.53 | View |
A-E | A-E | K31 | Y489 | K31 | Y489 | Hydrophobic | Hydrophobic | 0.25 | View |
A-E | A-E | T27 | Y473 | T27 | Y473 | Hydrophobic | Hydrophobic | 0.23 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.32 | View |
A-E | A-E | H34 | R403 | H34 | R403 | Repulsive | Repulsive | 0.6 | View |
A-E | A-E | D38 | Y449 | D38 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
A-E | A-E | S19 | A475 | S19 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
A-E | A-E | T27 | F456 | T27 | F456 | Hydrophobic | Hydrophobic | 0.27 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.27 | View |
A-E | A-E | Y41 | Q498 | Y41 | Q498 | Hydrophobic | Hydrophobic | 0.43 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.43 | View |
A-E | A-E | Y83 | F486 | Y83 | F486 | Hydrophobic | Hydrophobic | 0.43 | View |
A-E | A-E | H34 | L455 | H34 | L455 | Hydrophobic | Hydrophobic | 0.56 | View |
A-E | A-E | M82 | F486 | M82 | F486 | Hydrophobic | Hydrophobic | 0.22 | View |
A-E | A-E | K353 | Y505 | K353 | Y505 | Hydrophobic | Hydrophobic | 0.49 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7DX4 | A-E | D30 | K417 | Attractive, Hydrogen Bonds | 3.51 | View |
7DX4 | A-E | D30 | K417 | Attractive, Hydrogen Bonds | 2.34 | View |
7DX4 | A-E | Y41 | N501 | Hydrogen Bonds | 3.24 | View |
7DX4_africa_mut | A-E | K31 | K484 | Repulsive | 3.90 | View |
7DX4_africa_mut | A-E | K31 | Y489 | Hydrophobic | 4.47 | View |
7DX4_africa_mut | A-E | K31 | Y489 | Hydrophobic | 4.38 | View |
7DX4_africa_mut | A-E | H34 | Y453 | Aromatic Stacking | 5.71 | View |
7DX4_africa_mut | A-E | H34 | Y453 | Aromatic Stacking | 5.71 | View |
7DX4_africa_mut | A-E | H34 | Q493 | Hydrophobic | 4.49 | View |
7DX4_africa_mut | A-E | M82 | F486 | Hydrophobic | 4.39 | View |
7DX4_africa_mut | A-E | Y83 | F486 | Hydrophobic | 4.17 | View |
7DX4_africa_mut | A-E | N330 | T500 | Hydrogen Bonds | 3.37 | View |
7DX4_africa_mut | A-E | K353 | Y501 | Hydrophobic | 3.81 | View |
7DX4_africa_mut | A-E | K353 | Y501 | Hydrophobic | 4.03 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |