Execution time: 10.0 seconds
Match RMSD = 0.55
VTR = 0.03
Average AVD = 0.49 Å
Chains(7DPM.pdb ): F versus E
Chains(7DPM_africa_mut.pdb ) F versus E
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7DPM | 2531 | 1 | 0 | 7 | 0 | 0 | 0 | 8 |
B7DPM_africa_mut | 2531 | 4 | 0 | 7 | 0 | 0 | 0 | 11 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-F | E-F | S53 | V503 | S53 | V503 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
E-F | E-F | A50 | V503 | A50 | V503 | Hydrophobic | Hydrophobic | 1.03 | View |
E-F | E-F | Y32 | S373 | Y32 | S373 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
E-F | E-F | Y32 | S375 | Y32 | S375 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
E-F | E-F | Y32 | F374 | Y32 | F374 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
E-F | E-F | S52 | Q506 | S52 | Q506 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
E-F | E-F | N92 | A372 | N92 | A372 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
E-F | E-F | Y32 | F374 | Y32 | F374 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |