Execution time: 8.0 seconds
Match RMSD = 0.83
VTR = 0.06
Average AVD = 0.72 Å
Chains(7D4G.pdb ): B versus N
Chains(7D4G_africa_mut.pdb ) B versus N
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7D4G | 502 | 37 | 10 | 9 | 0 | 0 | 2 | 58 |
B7D4G_africa_mut | 499 | 50 | 2 | 10 | 0 | 0 | 2 | 64 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-N | B-N | Y248 | Y28 | Y248 | Y28 | Hydrophobic | Hydrophobic | 0.63 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.13 | View |
B-N | B-N | Y145 | P102 | Y145 | P102 | Hydrophobic | Hydrophobic | 0.63 | View |
B-N | B-N | S247 | Y28 | L249 | Y28 | Hydrogen Bonds | Hydrogen Bonds | 1.04 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Aromatic Stacking | 0.86 | View | |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.43 | View |
B-N | B-N | Y144 | T29 | Y144 | T29 | Hydrophobic | Hydrophobic | 0.36 | View |
B-N | B-N | Y144 | T29 | Y144 | T29 | Hydrophobic | Hydrophobic | 0.31 | View |
B-N | B-N | K147 | P31 | K147 | P31 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.25 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.26 | View |
B-N | B-N | Y248 | P102 | Y248 | P102 | Hydrophobic | Hydrophobic | 0.89 | View |
B-N | B-N | K147 | P31 | K147 | P31 | Hydrophobic | Hydrophobic | 0.52 | View |
B-N | B-N | Y248 | E32 | Y248 | E32 | Hydrogen Bonds | Hydrogen Bonds | 1.47 | View |
B-N | B-N | K147 | V33 | K147 | V33 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.29 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 0.85 | View |
B-N | B-N | Y248 | Y28 | Y248 | Y28 | Aromatic Stacking | Aromatic Stacking | 0.81 | View |
B-N | B-N | Y248 | E32 | Y248 | E32 | Hydrogen Bonds | Hydrogen Bonds | 0.83 | View |
B-N | B-N | Y248 | V33 | Y248 | V33 | Hydrophobic | Hydrophobic | 0.54 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.28 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.18 | View |
B-N | B-N | Y248 | T101 | L249 | T101 | Hydrophobic | Hydrophobic | 1.4 | View |
B-N | B-N | K147 | E73 | K147 | E73 | Attractive | Attractive | 0.16 | View |
B-N | B-N | R246 | Y28 | Y248 | Y28 | Hydrophobic | Hydrophobic | 1.77 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.29 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 0.94 | View |
B-N | B-N | K147 | P31 | K147 | P31 | Hydrophobic | Hydrophobic | 0.54 | View |
B-N | B-N | Y248 | V33 | Y248 | V33 | Hydrophobic | Hydrophobic | 0.46 | View |
B-N | B-N | Y248 | P102 | Y248 | P102 | Hydrophobic | Hydrophobic | 1.31 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.24 | View |
B-N | B-N | Y248 | Y28 | Y248 | Y28 | Hydrophobic | Hydrophobic | 1.0 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.25 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.25 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.13 | View |
B-N | B-N | Y144 | E32 | Y144 | E32 | Hydrophobic | Hydrophobic | 0.21 | View |
B-N | B-N | Y248 | T101 | Y248 | T101 | Hydrophobic | Hydrophobic | 1.03 | View |
B-N | B-N | Y145 | E32 | Y145 | E32 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 0.94 | View |
B-N | B-N | Y248 | Y28 | Y248 | Y28 | Hydrophobic | Hydrophobic | 0.51 | View |
B-N | B-N | Y145 | P102 | Y145 | P102 | Hydrophobic | Hydrophobic | 0.68 | View |
B-N | B-N | Y248 | F103 | Y248 | F103 | Hydrophobic | Hydrophobic | 1.28 | View |
B-N | B-N | W152 | F103 | W152 | F103 | Hydrophobic | Hydrophobic | 0.29 | View |
B-N | B-N | Y248 | P102 | Y248 | P102 | Hydrophobic | Hydrophobic | 1.18 | View |
B-N | B-N | Y248 | Y28 | Y248 | Y28 | Hydrophobic | Hydrophobic | 0.58 | View |
B-N | B-N | K147 | E73 | K147 | E73 | Attractive | Attractive | 0.25 | View |
B-N | B-N | K150 | P54 | K150 | P54 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7D4G | B-N | R246 | G27 | Hydrogen Bonds | 2.87 | View |
7D4G | B-N | R246 | Y28 | Hydrophobic | 4.41 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.84 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.89 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.72 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.25 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.25 | View |
7D4G | B-N | R246 | E32 | Attractive, Hydrogen Bonds | 3.30 | View |
7D4G | B-N | R246 | E32 | Attractive | 5.54 | View |
7D4G | B-N | R246 | E32 | Attractive | 4.97 | View |
7D4G_africa_mut | B-N | Y248 | Y28 | Hydrophobic | 4.29 | View |
7D4G_africa_mut | B-N | Y248 | Y28 | Hydrophobic | 4.38 | View |
7D4G_africa_mut | B-N | Y248 | E32 | Hydrophobic | 4.24 | View |
7D4G_africa_mut | B-N | Y248 | V33 | Hydrogen Bonds | 3.37 | View |
7D4G_africa_mut | B-N | Y248 | P102 | Hydrophobic | 3.93 | View |
7D4G_africa_mut | B-N | Y248 | P102 | Hydrophobic | 3.68 | View |
7D4G_africa_mut | B-N | Y248 | P102 | Hydrophobic | 3.54 | View |
7D4G_africa_mut | B-N | Y248 | P102 | Hydrophobic | 4.23 | View |
7D4G_africa_mut | B-N | Y248 | P102 | Hydrophobic | 3.24 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Aromatic Stacking | 5.15 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Hydrophobic | 4.31 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Hydrophobic | 3.24 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Hydrophobic | 3.63 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Hydrophobic | 4.06 | View |
7D4G_africa_mut | B-N | Y248 | F103 | Hydrophobic | 4.39 | View |
7D4G_africa_mut | B-N | L249 | T101 | Hydrophobic | 4.32 | View |
7D4G_africa_mut | B-N | T250 | E1 | Hydrogen Bonds | 3.86 | View |
7D4G_africa_mut | B-N | S256 | E1 | Hydrogen Bonds | 3.87 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |