Execution time: 49.0 seconds
Match RMSD = 0.72
VTR = 0.05
Average AVD = 0.66 Å
Chains(7D0C.pdb ): C versus G
Chains(7D0C_africa_mut.pdb ) C versus G
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7D0C | 3860 | 7 | 0 | 17 | 0 | 0 | 1 | 25 |
B7D0C_africa_mut | 3851 | 18 | 0 | 18 | 0 | 0 | 2 | 38 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-G | C-G | N487 | E1 | N487 | E1 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
C-G | C-G | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.66 | View |
C-G | C-G | A475 | F27 | A475 | F27 | Hydrophobic | Hydrophobic | 0.71 | View |
C-G | C-G | S477 | T28 | S477 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
C-G | C-G | G476 | T28 | G476 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
C-G | C-G | T415 | S56 | T415 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
C-G | C-G | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
C-G | C-G | F456 | Y33 | F456 | Y33 | Aromatic Stacking | Aromatic Stacking | 0.54 | View |
C-G | C-G | D420 | S56 | D420 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-G | C-G | K417 | Y33 | N417 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 1.83 | View |
C-G | C-G | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
C-G | C-G | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
C-G | C-G | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.97 | View |
C-G | C-G | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
C-G | C-G | F456 | Y99 | F456 | Y99 | Hydrophobic | Hydrophobic | 0.88 | View |
C-G | C-G | A475 | F27 | A475 | F27 | Hydrophobic | Hydrophobic | 0.79 | View |
C-G | C-G | T415 | Y58 | T415 | Y58 | Hydrophobic | Hydrophobic | 0.34 | View |
C-G | C-G | G416 | Y58 | G416 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
C-G | C-G | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.7 | View |
C-G | C-G | Q474 | S31 | Q474 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
C-G | C-G | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
C-G | C-G | K458 | S30 | K458 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7D0C | C-G | K417 | Y52 | Hydrophobic | 4.25 | View |
7D0C | C-G | K417 | G100 | Hydrogen Bonds | 3.74 | View |
7D0C | C-G | K417 | F102 | Hydrophobic | 3.80 | View |
7D0C_africa_mut | C-G | F456 | Y33 | Hydrophobic | 3.87 | View |
7D0C_africa_mut | C-G | F456 | Y33 | Hydrophobic | 3.81 | View |
7D0C_africa_mut | C-G | F456 | Y33 | Hydrophobic | 4.42 | View |
7D0C_africa_mut | C-G | F456 | Y33 | Hydrophobic | 3.70 | View |
7D0C_africa_mut | C-G | K458 | S31 | Hydrogen Bonds | 3.67 | View |
7D0C_africa_mut | C-G | A475 | F27 | Hydrophobic | 4.04 | View |
7D0C_africa_mut | C-G | S477 | T28 | Hydrogen Bonds | 3.77 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 4.33 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Aromatic Stacking | 4.90 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 3.82 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 3.96 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 4.26 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 3.90 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 4.20 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 4.14 | View |
7D0C_africa_mut | C-G | Y489 | Y99 | Hydrophobic | 4.15 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |