Execution time: 98.0 seconds
Match RMSD = 0.59
VTR = 0.01
Average AVD = 0.55 Å
Chains(7D03.pdb ): A versus H
Chains(7D03_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7D03 | 3412 | 52 | 0 | 10 | 0 | 0 | 2 | 64 |
B7D03_africa_mut | 3403 | 54 | 0 | 9 | 0 | 3 | 2 | 68 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | Y453 | Y55 | Y453 | Y55 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
A-H | A-H | E484 | Y103 | K484 | Y103 | Hydrophobic | Hydrophobic | 0.68 | View |
A-H | A-H | G485 | R101 | G485 | R101 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.75 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.38 | View |
A-H | A-H | Y489 | Y34 | Y489 | Y34 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.54 | View |
A-H | A-H | E484 | Y103 | K484 | Y103 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.75 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.83 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.56 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.28 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.65 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.28 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.65 | View |
A-H | A-H | Y449 | A109 | Y449 | A109 | Hydrogen Bonds | Hydrogen Bonds | 0.79 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.46 | View |
A-H | A-H | Q493 | Y54 | Q493 | Y54 | Hydrophobic | Hydrophobic | 0.39 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.83 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.35 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.38 | View |
A-H | A-H | L452 | Y104 | L452 | Y104 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | E484 | Y103 | K484 | Y103 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.69 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | G485 | Y103 | G485 | Y103 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.56 | View |
A-H | A-H | Q493 | Y35 | Q493 | Y35 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | Y449 | A109 | Y449 | A109 | Hydrophobic | Hydrophobic | 0.7 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.68 | View |
A-H | A-H | Y505 | S56 | Y505 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.92 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.71 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.3 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.49 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.47 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.32 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.75 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.65 | View |
A-H | A-H | E484 | Y103 | K484 | Y103 | Hydrophobic | Hydrophobic | 0.53 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Aromatic Stacking | Aromatic Stacking | 0.57 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 1.26 | View |
A-H | A-H | G485 | R101 | G485 | R101 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.83 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.49 | View |
A-H | A-H | Y449 | A109 | Y449 | A109 | Hydrophobic | Hydrophobic | 0.69 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.41 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.37 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.49 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.47 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.75 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.63 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.59 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.5 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.52 | View |
A-H | A-H | C488 | R101 | C488 | R101 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.71 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.67 | View |
A-H | A-H | F486 | W114 | F486 | W114 | Hydrophobic | Hydrophobic | 0.6 | View |
A-H | A-H | F490 | Y104 | F490 | Y104 | Hydrophobic | Hydrophobic | 0.56 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7D03 | A-H | K417 | Y55 | Hydrophobic | 3.98 | View |
7D03 | A-H | K417 | Y55 | Hydrogen Bonds | 3.20 | View |
7D03_africa_mut | A-H | K484 | R101 | Repulsive | 4.83 | View |
7D03_africa_mut | A-H | K484 | R101 | Repulsive | 4.60 | View |
7D03_africa_mut | A-H | K484 | R101 | Repulsive | 4.15 | View |
7D03_africa_mut | A-H | K484 | Y103 | Hydrophobic | 4.38 | View |
7D03_africa_mut | A-H | K484 | Y103 | Hydrophobic | 3.27 | View |
7D03_africa_mut | A-H | K484 | Y103 | Hydrophobic | 3.80 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |