Execution time: 47.0 seconds
Match RMSD = 0.77
VTR = 0.06
Average AVD = 0.71 Å
Chains(7D00.pdb ): C versus N
Chains(7D00_africa_mut.pdb ) C versus N
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7D00 | 3854 | 3 | 0 | 4 | 0 | 0 | 0 | 7 |
B7D00_africa_mut | 3845 | 7 | 0 | 7 | 0 | 0 | 0 | 14 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-N | C-N | Y505 | I29 | Y505 | I29 | Hydrophobic | Hydrophobic | 1.2 | View |
C-N | C-N | G502 | G28 | G502 | G28 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
C-N | C-N | Y505 | I29 | Y501 | I29 | Hydrophobic | Hydrophobic | 0.9 | View |
C-N | C-N | Y505 | Q3 | Y505 | Q3 | Hydrogen Bonds | Hydrogen Bonds | 0.81 | View |
C-N | C-N | G496 | S30 | G496 | S30 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
C-N | C-N | Y505 | I29 | Y505 | I29 | Hydrophobic | Hydrophobic | 0.55 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7D00 | C-N | N501 | S30 | Hydrogen Bonds | 3.78 | View |
7D00_africa_mut | C-N | R403 | N92 | Hydrogen Bonds | 2.86 | View |
7D00_africa_mut | C-N | R403 | N92 | Hydrogen Bonds | 3.66 | View |
7D00_africa_mut | C-N | Y501 | Q27 | Hydrogen Bonds | 3.34 | View |
7D00_africa_mut | C-N | Y501 | G28 | Hydrogen Bonds | 3.46 | View |
7D00_africa_mut | C-N | Y501 | I29 | Hydrophobic | 4.34 | View |
7D00_africa_mut | C-N | Y501 | I29 | Hydrophobic | 3.91 | View |
7D00_africa_mut | C-N | Y501 | I29 | Hydrophobic | 3.73 | View |
7D00_africa_mut | C-N | Y501 | I29 | Hydrophobic | 3.12 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |