Execution time: 36.0 seconds
Match RMSD = 0.82
VTR = 0.06
Average AVD = 0.78 Å
Chains(7CWU.pdb ): A versus J
Chains(7CWU_africa_mut.pdb ) A versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CWU | 4592 | 46 | 10 | 9 | 0 | 0 | 3 | 68 |
B7CWU_africa_mut | 4583 | 63 | 2 | 8 | 0 | 0 | 3 | 76 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
J-A | J-A | F52 | K147 | F52 | K147 | Hydrophobic | Hydrophobic | 0.46 | View |
J-A | J-A | V33 | Y248 | V33 | Y248 | Hydrophobic | Hydrophobic | 0.48 | View |
J-A | J-A | Y28 | Y248 | Y28 | Y248 | Hydrophobic | Hydrophobic | 1.16 | View |
J-A | J-A | P102 | Y145 | P102 | Y145 | Hydrophobic | Hydrophobic | 0.7 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.75 | View |
J-A | J-A | T101 | Y248 | T101 | Y248 | Hydrophobic | Hydrophobic | 0.77 | View |
J-A | J-A | T101 | Y248 | T101 | L249 | Hydrophobic | Hydrophobic | 1.69 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.8 | View |
J-A | J-A | Y28 | Y248 | Y28 | Y248 | Hydrophobic | Hydrophobic | 0.69 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Hydrophobic | Hydrophobic | 0.72 | View |
J-A | J-A | P102 | Y145 | P102 | Y145 | Hydrophobic | Hydrophobic | 0.76 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.77 | View |
J-A | J-A | E32 | Y144 | E32 | Y144 | Hydrophobic | Hydrophobic | 0.46 | View |
J-A | J-A | F52 | K147 | F52 | K147 | Hydrophobic | Hydrophobic | 0.43 | View |
J-A | J-A | T101 | Y248 | T101 | Y248 | Hydrophobic | Hydrophobic | 1.19 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.97 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.74 | View |
J-A | J-A | F52 | K147 | F52 | K147 | Hydrophobic | Hydrophobic | 0.43 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.89 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Aromatic Stacking | Aromatic Stacking | 0.62 | View |
J-A | J-A | T29 | Y144 | T29 | Y144 | Hydrophobic | Hydrophobic | 0.6 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Hydrophobic | Hydrophobic | 0.89 | View |
J-A | J-A | Y28 | Y248 | Y28 | Y248 | Hydrophobic | Hydrophobic | 0.74 | View |
J-A | J-A | F52 | K147 | F52 | K147 | Hydrophobic | Hydrophobic | 0.46 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Hydrophobic | Hydrophobic | 0.66 | View |
J-A | J-A | T101 | Y248 | T101 | Y248 | Hydrophobic | Hydrophobic | 1.08 | View |
J-A | J-A | E73 | K147 | E73 | K147 | Attractive | Attractive | 0.53 | View |
J-A | J-A | Y28 | Y248 | Y28 | Y248 | Aromatic Stacking | 0.67 | View | |
J-A | J-A | T29 | Y144 | T29 | Y144 | Hydrophobic | Hydrophobic | 0.56 | View |
J-A | J-A | D110 | L249 | D110 | L249 | Hydrophobic | Hydrophobic | 1.14 | View |
J-A | J-A | P102 | K147 | P102 | K147 | Hydrophobic | Hydrophobic | 0.55 | View |
J-A | J-A | E32 | Y145 | E32 | Y145 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.85 | View |
J-A | J-A | T101 | Y248 | T101 | L249 | Hydrophobic | Hydrophobic | 1.51 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Aromatic Stacking | Aromatic Stacking | 0.51 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.87 | View |
J-A | J-A | P31 | K147 | P31 | K147 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
J-A | J-A | E32 | Y248 | E32 | Y248 | Hydrogen Bonds | Hydrogen Bonds | 1.16 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 1.0 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.81 | View |
J-A | J-A | P31 | K147 | P31 | K147 | Hydrophobic | Hydrophobic | 0.87 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.83 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Hydrophobic | Hydrophobic | 0.63 | View |
J-A | J-A | Y28 | S247 | Y28 | L249 | Hydrogen Bonds | Hydrogen Bonds | 1.39 | View |
J-A | J-A | E73 | K147 | E73 | K147 | Attractive | Attractive | 0.61 | View |
J-A | J-A | P54 | K150 | P54 | K150 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
J-A | J-A | V33 | Y248 | V33 | Y248 | Hydrophobic | Hydrophobic | 0.66 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.88 | View |
J-A | J-A | Y28 | Y248 | Y28 | Y248 | Hydrophobic | Hydrophobic | 0.71 | View |
J-A | J-A | F103 | Y145 | F103 | Y145 | Hydrophobic | Hydrophobic | 0.93 | View |
J-A | J-A | P102 | Y145 | P102 | Y145 | Hydrophobic | Hydrophobic | 0.65 | View |
J-A | J-A | F103 | W152 | F103 | W152 | Hydrophobic | Hydrophobic | 0.69 | View |
J-A | J-A | P102 | K147 | P102 | K147 | Hydrophobic | Hydrophobic | 0.55 | View |
J-A | J-A | E32 | Y248 | E32 | Y248 | Hydrogen Bonds | Hydrogen Bonds | 1.02 | View |
J-A | J-A | P102 | Y145 | P102 | Y145 | Hydrophobic | Hydrophobic | 0.59 | View |
J-A | J-A | V33 | K147 | V33 | K147 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CWU | J-A | G27 | R246 | Hydrogen Bonds | 2.87 | View |
7CWU | J-A | Y28 | R246 | Hydrophobic | 4.42 | View |
7CWU | J-A | Y28 | R246 | Hydrophobic | 4.41 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.84 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.72 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.25 | View |
7CWU | J-A | E32 | R246 | Attractive | 5.54 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.89 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.25 | View |
7CWU | J-A | E32 | R246 | Attractive, Hydrogen Bonds | 3.30 | View |
7CWU | J-A | E32 | R246 | Attractive | 4.97 | View |
7CWU_africa_mut | J-A | Y28 | Y248 | Aromatic Stacking | 4.94 | View |
7CWU_africa_mut | J-A | Y28 | Y248 | Hydrophobic | 4.49 | View |
7CWU_africa_mut | J-A | Y28 | Y248 | Hydrophobic | 4.45 | View |
7CWU_africa_mut | J-A | Y28 | Y248 | Hydrophobic | 4.44 | View |
7CWU_africa_mut | J-A | Y28 | L249 | Hydrophobic | 3.84 | View |
7CWU_africa_mut | J-A | E32 | Y248 | Hydrophobic | 3.79 | View |
7CWU_africa_mut | J-A | E32 | Y248 | Hydrophobic | 4.31 | View |
7CWU_africa_mut | J-A | V33 | Y248 | Hydrogen Bonds | 2.95 | View |
7CWU_africa_mut | J-A | A34 | K147 | Hydrophobic | 4.48 | View |
7CWU_africa_mut | J-A | T101 | L249 | Hydrophobic | 3.59 | View |
7CWU_africa_mut | J-A | T101 | L249 | Hydrophobic | 3.60 | View |
7CWU_africa_mut | J-A | P102 | Y248 | Hydrophobic | 4.39 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 4.35 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.62 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.15 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.11 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.57 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.53 | View |
7CWU_africa_mut | J-A | F103 | Y145 | Hydrophobic | 3.95 | View |
7CWU_africa_mut | J-A | F103 | W152 | Hydrophobic | 3.77 | View |
7CWU_africa_mut | J-A | F103 | W152 | Hydrophobic | 4.15 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |