Execution time: 29.0 seconds
Match RMSD = 0.6
VTR = 0.03
Average AVD = 0.5 Å
Chains(7CWN.pdb ): C versus J
Chains(7CWN_africa_mut.pdb ) C versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CWN | 4583 | 20 | 8 | 3 | 0 | 0 | 2 | 33 |
B7CWN_africa_mut | 4574 | 24 | 0 | 5 | 0 | 0 | 2 | 31 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.4 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.23 | View |
C-J | C-J | E484 | R96 | K484 | R96 | Attractive | Hydrogen Bonds | 1.93 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.39 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.57 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Aromatic Stacking | Aromatic Stacking | 0.39 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.15 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.16 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.62 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.41 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
C-J | C-J | E484 | R96 | K484 | R96 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.59 | View |
C-J | C-J | E484 | R96 | K484 | R96 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.48 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.34 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.69 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.28 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.71 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.36 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.61 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.25 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.43 | View |
C-J | C-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.53 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.75 | View |
C-J | C-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.65 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CWN | C-J | E484 | R96 | Attractive | 5.33 | View |
7CWN | C-J | E484 | R96 | Attractive | 5.91 | View |
7CWN | C-J | E484 | R96 | Attractive | 4.72 | View |
7CWN | C-J | E484 | R96 | Attractive | 4.42 | View |
7CWN | C-J | E484 | R96 | Attractive | 4.44 | View |
7CWN | C-J | E484 | R96 | Attractive | 5.33 | View |
7CWN | C-J | E484 | R96 | Attractive | 4.09 | View |
7CWN_africa_mut | C-J | F486 | Y92 | Hydrophobic | 4.42 | View |
7CWN_africa_mut | C-J | F486 | Y92 | Hydrophobic | 4.24 | View |
7CWN_africa_mut | C-J | F486 | Y92 | Hydrophobic | 4.32 | View |
7CWN_africa_mut | C-J | Y489 | Y32 | Hydrophobic | 4.44 | View |
7CWN_africa_mut | C-J | Y489 | Y32 | Hydrogen Bonds | 3.60 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |