Execution time: 16.0 seconds
Match RMSD = 0.75
VTR = 0.05
Average AVD = 0.69 Å
Chains(7CWM.pdb ): B versus J
Chains(7CWM_africa_mut.pdb ) B versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CWM | 3883 | 20 | 8 | 3 | 0 | 0 | 2 | 33 |
B7CWM_africa_mut | 3874 | 24 | 0 | 5 | 0 | 0 | 2 | 31 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.63 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.47 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.59 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.46 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.59 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.69 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.71 | View |
B-J | B-J | E484 | R96 | K484 | R96 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.64 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.75 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.7 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Aromatic Stacking | Aromatic Stacking | 0.69 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.83 | View |
B-J | B-J | E484 | R96 | K484 | R96 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.76 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.72 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.36 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.53 | View |
B-J | B-J | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.65 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.96 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.31 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.85 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.86 | View |
B-J | B-J | E484 | R96 | K484 | R96 | Attractive | Hydrogen Bonds | 1.83 | View |
B-J | B-J | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.93 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CWM | B-J | E484 | R96 | Attractive | 5.33 | View |
7CWM | B-J | E484 | R96 | Attractive | 5.91 | View |
7CWM | B-J | E484 | R96 | Attractive | 4.72 | View |
7CWM | B-J | E484 | R96 | Attractive | 4.42 | View |
7CWM | B-J | E484 | R96 | Attractive | 4.44 | View |
7CWM | B-J | E484 | R96 | Attractive | 5.33 | View |
7CWM | B-J | E484 | R96 | Attractive | 4.09 | View |
7CWM_africa_mut | B-J | F486 | Y92 | Hydrophobic | 4.35 | View |
7CWM_africa_mut | B-J | F486 | Y92 | Hydrophobic | 4.13 | View |
7CWM_africa_mut | B-J | F486 | Y92 | Hydrophobic | 4.31 | View |
7CWM_africa_mut | B-J | Y489 | Y32 | Hydrophobic | 4.41 | View |
7CWM_africa_mut | B-J | Y489 | Y32 | Hydrogen Bonds | 3.60 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |