Execution time: 34.0 seconds
Match RMSD = 0.61
VTR = 0.04
Average AVD = 0.51 Å
Chains(7CWL.pdb ): A versus H
Chains(7CWL_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CWL | 3900 | 27 | 12 | 5 | 0 | 0 | 1 | 45 |
B7CWL_africa_mut | 3891 | 32 | 0 | 8 | 0 | 0 | 1 | 41 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.59 | View |
A-H | A-H | Y489 | M103 | Y489 | M103 | Hydrophobic | Hydrophobic | 0.83 | View |
A-H | A-H | F490 | M103 | F490 | M103 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | N481 | N57 | N481 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-H | A-H | Y489 | L102 | Y489 | L102 | Hydrophobic | Hydrophobic | 1.22 | View |
A-H | A-H | Y489 | M103 | Y489 | M103 | Hydrophobic | Hydrophobic | 0.37 | View |
A-H | A-H | T470 | S31 | T470 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.2 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.49 | View |
A-H | A-H | Y489 | M103 | Y489 | M103 | Hydrophobic | Hydrophobic | 0.47 | View |
A-H | A-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.64 | View |
A-H | A-H | T470 | D54 | T470 | D54 | Hydrophobic | Hydrophobic | 0.78 | View |
A-H | A-H | T470 | S31 | T470 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
A-H | A-H | Y489 | M103 | Y489 | M103 | Hydrophobic | Hydrophobic | 0.35 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.28 | View |
A-H | A-H | L455 | M103 | L455 | M103 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.36 | View |
A-H | A-H | V483 | V50 | V483 | V50 | Hydrophobic | Hydrophobic | 0.57 | View |
A-H | A-H | Y489 | L102 | Y489 | L102 | Hydrophobic | Hydrophobic | 1.68 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.26 | View |
A-H | A-H | F490 | Y32 | F490 | Y32 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | F490 | M103 | F490 | M103 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | L492 | N104 | L492 | N104 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-H | A-H | V483 | Y59 | V483 | Y59 | Hydrophobic | Hydrophobic | 0.63 | View |
A-H | A-H | F456 | M103 | F456 | M103 | Hydrophobic | Hydrophobic | 0.22 | View |
A-H | A-H | L455 | M103 | L455 | M103 | Hydrophobic | Hydrophobic | 0.51 | View |
A-H | A-H | E471 | D54 | E471 | D54 | Hydrophobic | Hydrophobic | 0.32 | View |
A-H | A-H | E484 | T101 | K484 | T101 | Hydrophobic | Hydrophobic | 1.05 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CWL | A-H | E484 | H35 | Attractive | 5.93 | View |
7CWL | A-H | E484 | H35 | Attractive | 4.27 | View |
7CWL | A-H | E484 | H35 | Attractive | 4.53 | View |
7CWL | A-H | E484 | H35 | Attractive, Hydrogen Bonds | 3.52 | View |
7CWL | A-H | E484 | R98 | Attractive | 5.17 | View |
7CWL | A-H | E484 | R98 | Attractive | 5.50 | View |
7CWL | A-H | E484 | R98 | Attractive | 4.09 | View |
7CWL | A-H | E484 | R98 | Attractive | 5.42 | View |
7CWL | A-H | E484 | R98 | Attractive | 5.97 | View |
7CWL | A-H | E484 | R98 | Attractive | 4.51 | View |
7CWL | A-H | E484 | H99 | Attractive | 4.02 | View |
7CWL | A-H | E484 | H99 | Attractive | 5.79 | View |
7CWL | A-H | E484 | T101 | Hydrophobic | 3.67 | View |
7CWL | A-H | Y489 | L102 | Hydrophobic | 4.03 | View |
7CWL_africa_mut | A-H | T470 | D54 | Hydrogen Bonds | 3.61 | View |
7CWL_africa_mut | A-H | E471 | D54 | Hydrogen Bonds | 3.82 | View |
7CWL_africa_mut | A-H | N481 | N57 | Hydrogen Bonds | 3.81 | View |
7CWL_africa_mut | A-H | V483 | Y59 | Hydrophobic | 4.32 | View |
7CWL_africa_mut | A-H | K484 | T101 | Hydrophobic | 3.27 | View |
7CWL_africa_mut | A-H | K484 | T101 | Hydrophobic | 2.94 | View |
7CWL_africa_mut | A-H | K484 | T101 | Hydrogen Bonds | 2.74 | View |
7CWL_africa_mut | A-H | Y489 | L102 | Hydrophobic | 4.45 | View |
7CWL_africa_mut | A-H | Y489 | M103 | Hydrophobic | 4.05 | View |
7CWL_africa_mut | A-H | F490 | M103 | Hydrophobic | 4.30 | View |
7CWL_africa_mut | A-H | F490 | M103 | Hydrophobic | 4.48 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |