VTR

2 main matches found (3 matches in total )

Execution time: 19.0 seconds

Match RMSD = 0.45

VTR = 0.01

Average AVD = 0.44 Å

Parameters

Chains(7CHH.pdb ): C versus K

Chains(7CHH_africa_mut.pdb ) C versus K

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CHH 3704 1 0 2 0 0 0 3
B7CHH_africa_mut 3697 2 0 2 0 0 0 4

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
C-K C-K N481 N33 N481 N33 Hydrogen Bonds Hydrogen Bonds 0.3 View
C-K C-K N481 N33 N481 N33 Hydrophobic Hydrophobic 0.55 View
C-K C-K P479 Y35 P479 Y35 Hydrogen Bonds Hydrogen Bonds 0.46 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CHH | 7CHH_africa_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7CHH_africa_mut C-K V483 L55 Hydrophobic 4.27 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph