Execution time: 11.0 seconds
Match RMSD = 0.7
VTR = 0.04
Average AVD = 0.62 Å
Chains(7CHF.pdb ): R versus A
Chains(7CHF_africa_mut.pdb ) R versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CHF | 1052 | 6 | 11 | 15 | 0 | 1 | 0 | 33 |
B7CHF_africa_mut | 1052 | 8 | 0 | 11 | 0 | 4 | 0 | 23 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
R-A | R-A | E484 | D106 | K484 | D106 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive Hydrogen Bonds | Repulsive | 1.11 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive | Repulsive | 1.14 | View |
R-A | R-A | G482 | Y105 | G482 | Y105 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
R-A | R-A | E484 | R100 | K484 | R100 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.15 | View |
R-A | R-A | L452 | T31 | L452 | T31 | Hydrophobic | Hydrophobic | 0.69 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive Hydrogen Bonds | Repulsive | 1.2 | View |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.21 | View |
R-A | R-A | N450 | N77 | N450 | N77 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
R-A | R-A | L452 | T31 | L452 | T31 | Hydrophobic | Hydrophobic | 0.62 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive | Repulsive | 1.18 | View |
R-A | R-A | F490 | T31 | F490 | T31 | Hydrophobic | Hydrophobic | 0.56 | View |
R-A | R-A | E484 | R100 | K484 | R100 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.16 | View |
R-A | R-A | G482 | D106 | G482 | D106 | Hydrogen Bonds | Hydrogen Bonds | 0.77 | View |
R-A | R-A | N450 | N77 | N450 | N77 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
R-A | R-A | G482 | L104 | G482 | L104 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
R-A | R-A | N450 | N74 | N450 | N74 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
R-A | R-A | Y449 | G26 | Y449 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CHF | R-A | E484 | R100 | Attractive | 5.88 | View |
7CHF | R-A | E484 | R100 | Attractive | 5.75 | View |
7CHF | R-A | E484 | R100 | Attractive | 5.72 | View |
7CHF | R-A | E484 | R102 | Hydrogen Bonds | 2.96 | View |
7CHF | R-A | E484 | R102 | Attractive, Hydrogen Bonds | 3.03 | View |
7CHF | R-A | E484 | R102 | Attractive | 3.82 | View |
7CHF | R-A | E484 | R102 | Attractive | 5.10 | View |
7CHF | R-A | E484 | R102 | Attractive, Hydrogen Bonds | 3.71 | View |
7CHF | R-A | E484 | D106 | Repulsive | 5.15 | View |
7CHF_africa_mut | R-A | R346 | S75 | Hydrogen Bonds | 3.62 | View |
7CHF_africa_mut | R-A | F490 | T31 | Hydrophobic | 4.36 | View |
7CHF_africa_mut | R-A | F490 | R102 | Hydrophobic | 4.48 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |