Execution time: 7.0 seconds
Match RMSD = 0.63
VTR = 0.03
Average AVD = 0.53 Å
Chains(7CHC.pdb ): R versus A
Chains(7CHC_africa_mut.pdb ) R versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CHC | 1042 | 10 | 9 | 16 | 0 | 1 | 0 | 36 |
B7CHC_africa_mut | 1042 | 13 | 0 | 12 | 0 | 4 | 0 | 29 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.2 | View |
R-A | R-A | G482 | L104 | G482 | L104 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
R-A | R-A | R346 | S75 | R346 | S75 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
R-A | R-A | L452 | T30 | L452 | T30 | Hydrophobic | Hydrophobic | 0.64 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive | Repulsive | 1.24 | View |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.24 | View |
R-A | R-A | N450 | N74 | N450 | N74 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
R-A | R-A | G482 | Y105 | G482 | Y105 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
R-A | R-A | Y449 | G26 | Y449 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
R-A | R-A | V483 | Y105 | V483 | Y105 | Hydrophobic | Hydrophobic | 0.38 | View |
R-A | R-A | L452 | T31 | L452 | T31 | Hydrophobic | Hydrophobic | 0.48 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive Hydrogen Bonds | Repulsive | 1.3 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive Hydrogen Bonds | Repulsive | 1.25 | View |
R-A | R-A | E484 | D106 | K484 | D106 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
R-A | R-A | E484 | R102 | K484 | R102 | Attractive | Repulsive | 1.26 | View |
R-A | R-A | F490 | R102 | F490 | R102 | Hydrophobic | Hydrophobic | 0.27 | View |
R-A | R-A | F490 | T31 | F490 | T31 | Hydrophobic | Hydrophobic | 0.42 | View |
R-A | R-A | L452 | T31 | L452 | T31 | Hydrophobic | Hydrophobic | 0.4 | View |
R-A | R-A | G482 | D106 | G482 | D106 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
R-A | R-A | R346 | S75 | R346 | S75 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
R-A | R-A | F490 | T31 | F490 | T31 | Hydrophobic | Hydrophobic | 0.45 | View |
R-A | R-A | L452 | A28 | L452 | A28 | Hydrophobic | Hydrophobic | 0.33 | View |
R-A | R-A | N450 | S75 | N450 | S75 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
R-A | R-A | E484 | R100 | K484 | R100 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
R-A | R-A | E484 | R100 | K484 | R100 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CHC | R-A | E484 | R100 | Attractive | 5.91 | View |
7CHC | R-A | E484 | R102 | Hydrogen Bonds | 3.25 | View |
7CHC | R-A | E484 | R102 | Attractive, Hydrogen Bonds | 3.18 | View |
7CHC | R-A | E484 | R102 | Attractive | 3.93 | View |
7CHC | R-A | E484 | R102 | Attractive | 5.23 | View |
7CHC | R-A | E484 | R102 | Attractive, Hydrogen Bonds | 3.76 | View |
7CHC | R-A | E484 | D106 | Repulsive | 5.05 | View |
7CHC_africa_mut | R-A | Y449 | A28 | Hydrophobic | 4.27 | View |
7CHC_africa_mut | R-A | Y449 | A28 | Hydrophobic | 4.48 | View |
7CHC_africa_mut | R-A | N450 | N77 | Hydrogen Bonds | 3.49 | View |
7CHC_africa_mut | R-A | F490 | R102 | Hydrophobic | 4.30 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |