Execution time: 8.0 seconds
Match RMSD = 0.48
VTR = 0.01
Average AVD = 0.44 Å
Chains(7CHB.pdb ): R versus H
Chains(7CHB_africa_mut.pdb ) R versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CHB | 614 | 22 | 2 | 21 | 0 | 0 | 0 | 45 |
B7CHB_africa_mut | 614 | 27 | 0 | 22 | 0 | 0 | 0 | 49 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
H-R | H-R | S53 | K458 | S53 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.68 | View |
H-R | H-R | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
H-R | H-R | Y52 | K417 | Y52 | N417 | Hydrophobic | Hydrophobic | 1.18 | View |
H-R | H-R | T28 | G476 | T28 | G476 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
H-R | H-R | L99 | F456 | L99 | F456 | Hydrophobic | Hydrophobic | 0.48 | View |
H-R | H-R | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
H-R | H-R | G26 | N487 | G26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
H-R | H-R | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
H-R | H-R | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.24 | View |
H-R | H-R | A102 | L455 | A102 | L455 | Hydrophobic | Hydrophobic | 0.43 | View |
H-R | H-R | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
H-R | H-R | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.32 | View |
H-R | H-R | T28 | S477 | T28 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
H-R | H-R | V107 | F486 | V107 | F486 | Hydrophobic | Hydrophobic | 0.39 | View |
H-R | H-R | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.39 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.29 | View |
H-R | H-R | S53 | R457 | S53 | R457 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
H-R | H-R | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.36 | View |
H-R | H-R | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
H-R | H-R | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.18 | View |
H-R | H-R | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
H-R | H-R | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
H-R | H-R | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.81 | View |
H-R | H-R | L99 | F456 | L99 | F456 | Hydrophobic | Hydrophobic | 0.5 | View |
H-R | H-R | A102 | F456 | A102 | F456 | Hydrophobic | Hydrophobic | 0.36 | View |
H-R | H-R | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
H-R | H-R | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
H-R | H-R | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.48 | View |
H-R | H-R | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
H-R | H-R | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.36 | View |
H-R | H-R | S53 | Y473 | S53 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.3 | View |
H-R | H-R | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
H-R | H-R | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.53 | View |
H-R | H-R | T28 | A475 | T28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
H-R | H-R | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.37 | View |
H-R | H-R | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.37 | View |
H-R | H-R | E101 | Y453 | E101 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
H-R | H-R | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.52 | View |
H-R | H-R | A102 | F456 | A102 | F456 | Hydrophobic | Hydrophobic | 0.38 | View |
H-R | H-R | V2 | F486 | V2 | F486 | Hydrophobic | Hydrophobic | 0.5 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CHB | H-R | E101 | K417 | Attractive | 4.63 | View |
7CHB | H-R | E101 | K417 | Attractive, Hydrogen Bonds | 3.03 | View |
7CHB_africa_mut | H-R | I27 | F486 | Hydrophobic | 4.49 | View |
7CHB_africa_mut | H-R | I27 | F486 | Hydrophobic | 4.41 | View |
7CHB_africa_mut | H-R | S31 | A475 | Hydrogen Bonds | 3.84 | View |
7CHB_africa_mut | H-R | Y33 | N417 | Hydrogen Bonds | 2.90 | View |
7CHB_africa_mut | H-R | Y33 | F456 | Hydrophobic | 4.47 | View |
7CHB_africa_mut | H-R | Y52 | Y421 | Hydrophobic | 4.44 | View |
7CHB_africa_mut | H-R | A102 | Y489 | Hydrophobic | 4.49 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |