Execution time: 11.0 seconds
Match RMSD = 0.46
VTR = 0.01
Average AVD = 0.41 Å
Chains(7CH5.pdb ): R versus H
Chains(7CH5_africa_mut.pdb ) R versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CH5 | 607 | 21 | 2 | 28 | 0 | 4 | 3 | 58 |
B7CH5_africa_mut | 607 | 22 | 0 | 30 | 0 | 4 | 4 | 60 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
H-R | H-R | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
H-R | H-R | Y102 | Y453 | Y102 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
H-R | H-R | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
H-R | H-R | E26 | S477 | E26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.32 | View |
H-R | H-R | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
H-R | H-R | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
H-R | H-R | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
H-R | H-R | E26 | N487 | E26 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
H-R | H-R | R31 | K458 | R31 | K458 | Repulsive | Repulsive | 0.41 | View |
H-R | H-R | S53 | R457 | S53 | R457 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
H-R | H-R | Y106 | F486 | Y106 | F486 | Hydrophobic | Hydrophobic | 0.3 | View |
H-R | H-R | Y106 | F486 | Y106 | F486 | Aromatic Stacking | Aromatic Stacking | 0.31 | View |
H-R | H-R | E26 | T478 | E26 | T478 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
H-R | H-R | Y102 | L455 | Y102 | L455 | Hydrophobic | Hydrophobic | 0.44 | View |
H-R | H-R | R31 | Q474 | R31 | Q474 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Hydrophobic | Hydrophobic | 0.25 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Hydrophobic | Hydrophobic | 0.23 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.35 | View |
H-R | H-R | R31 | K458 | R31 | K458 | Repulsive | Repulsive | 0.49 | View |
H-R | H-R | R31 | Y473 | R31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
H-R | H-R | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
H-R | H-R | Y52 | K417 | Y52 | N417 | Hydrophobic | Hydrophobic | 1.26 | View |
H-R | H-R | Y58 | T415 | Y58 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
H-R | H-R | I28 | A475 | I28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
H-R | H-R | R31 | Y473 | R31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
H-R | H-R | Y58 | T415 | Y58 | T415 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
H-R | H-R | Y99 | L455 | Y99 | L455 | Hydrophobic | Hydrophobic | 0.36 | View |
H-R | H-R | Y99 | F456 | Y99 | F456 | Hydrophobic | Hydrophobic | 0.3 | View |
H-R | H-R | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
H-R | H-R | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.37 | View |
H-R | H-R | Y106 | F486 | Y106 | F486 | Hydrophobic | Hydrophobic | 0.44 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Aromatic Stacking | Aromatic Stacking | 0.17 | View |
H-R | H-R | R31 | K458 | R31 | K458 | Repulsive | Repulsive | 0.4 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Hydrophobic | Hydrophobic | 0.26 | View |
H-R | H-R | R31 | Y473 | R31 | Y473 | Hydrophobic | Hydrophobic | 0.4 | View |
H-R | H-R | Y99 | F456 | Y99 | F456 | Aromatic Stacking | Aromatic Stacking | 0.22 | View |
H-R | H-R | Y58 | G416 | Y58 | G416 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
H-R | H-R | Y99 | F456 | Y99 | F456 | Hydrophobic | Hydrophobic | 0.29 | View |
H-R | H-R | Y99 | F456 | Y99 | F456 | Hydrophobic | Hydrophobic | 0.26 | View |
H-R | H-R | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.46 | View |
H-R | H-R | E26 | S477 | E26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Hydrophobic | Hydrophobic | 0.29 | View |
H-R | H-R | Y102 | L455 | Y102 | L455 | Hydrophobic | Hydrophobic | 0.37 | View |
H-R | H-R | R31 | Q474 | R31 | Q474 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
H-R | H-R | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.89 | View |
H-R | H-R | E26 | S477 | E26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.81 | View |
H-R | H-R | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
H-R | H-R | R31 | K458 | R31 | K458 | Repulsive | Repulsive | 0.5 | View |
H-R | H-R | E26 | T478 | E26 | T478 | Hydrogen Bonds | Hydrogen Bonds | 0.7 | View |
H-R | H-R | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
H-R | H-R | E26 | S477 | E26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
H-R | H-R | Y99 | Y489 | Y99 | Y489 | Hydrophobic | Hydrophobic | 0.31 | View |
H-R | H-R | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CH5 | H-R | Y33 | K417 | Hydrophobic | 4.46 | View |
7CH5 | H-R | G100 | K417 | Hydrogen Bonds | 3.49 | View |
7CH5 | H-R | D101 | K417 | Attractive | 5.61 | View |
7CH5 | H-R | D101 | K417 | Attractive | 4.10 | View |
7CH5_africa_mut | H-R | F27 | F486 | Hydrophobic | 4.29 | View |
7CH5_africa_mut | H-R | R31 | Q474 | Hydrogen Bonds | 3.87 | View |
7CH5_africa_mut | H-R | Y33 | N417 | Hydrogen Bonds | 3.15 | View |
7CH5_africa_mut | H-R | Y33 | F456 | Aromatic Stacking | 5.98 | View |
7CH5_africa_mut | H-R | Y33 | F456 | Hydrophobic | 4.47 | View |
7CH5_africa_mut | H-R | Y99 | Q493 | Hydrogen Bonds | 3.71 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |