Execution time: 10.0 seconds
Match RMSD = 0.82
VTR = 0.07
Average AVD = 0.66 Å
Chains(7CH4.pdb ): R versus L
Chains(7CH4_africa_mut.pdb ) R versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CH4 | 619 | 2 | 7 | 10 | 0 | 0 | 0 | 19 |
B7CH4_africa_mut | 619 | 15 | 7 | 11 | 0 | 0 | 0 | 33 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
L-R | L-R | Q27 | G502 | Q27 | G502 | Hydrogen Bonds | Hydrogen Bonds | 0.87 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.88 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.92 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.36 | View |
L-R | L-R | I29 | Y505 | I29 | Y501 | Hydrophobic | Hydrophobic | 1.99 | View |
L-R | L-R | I29 | Y505 | I29 | Y501 | Hydrophobic | Hydrophobic | 1.42 | View |
L-R | L-R | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.71 | View |
L-R | L-R | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
L-R | L-R | N92 | Y453 | N92 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
L-R | L-R | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
L-R | L-R | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
L-R | L-R | Q90 | Y505 | Q90 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
L-R | L-R | S30 | Q498 | S30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.4 | View |
L-R | L-R | D32 | R403 | D32 | R403 | Attractive | Attractive | 0.28 | View |
L-R | L-R | G28 | G502 | G28 | G502 | Hydrogen Bonds | Hydrogen Bonds | 1.35 | View |
L-R | L-R | D94 | R408 | D94 | R408 | Attractive | Attractive | 0.18 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CH4 | L-R | S30 | N501 | Hydrogen Bonds | 3.67 | View |
7CH4_africa_mut | L-R | I2 | Y501 | Hydrophobic | 4.10 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 4.44 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 4.30 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 3.96 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 3.71 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 3.32 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 4.14 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 4.47 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 3.36 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 4.18 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrophobic | 2.94 | View |
7CH4_africa_mut | L-R | Q27 | Y501 | Hydrogen Bonds | 3.29 | View |
7CH4_africa_mut | L-R | G28 | Y501 | Hydrogen Bonds | 3.53 | View |
7CH4_africa_mut | L-R | I29 | Y501 | Hydrophobic | 4.21 | View |
7CH4_africa_mut | L-R | I29 | Y501 | Hydrophobic | 4.12 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |