Execution time: 13.0 seconds
Match RMSD = 0.47
VTR = 0.02
Average AVD = 0.46 Å
Chains(7CDJ.pdb ): E versus L
Chains(7CDJ_africa_mut.pdb ) E versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7CDJ | 619 | 12 | 0 | 7 | 0 | 0 | 1 | 20 |
B7CDJ_africa_mut | 619 | 17 | 0 | 9 | 0 | 0 | 1 | 27 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.48 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.56 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.26 | View |
E-L | E-L | T478 | Y30 | T478 | Y30 | Hydrophobic | Hydrophobic | 0.61 | View |
E-L | E-L | N481 | Q25 | N481 | Q25 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.52 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Aromatic Stacking | Aromatic Stacking | 0.26 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.48 | View |
E-L | E-L | N487 | Y30 | N487 | Y30 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
E-L | E-L | T478 | Y30 | T478 | Y30 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.46 | View |
E-L | E-L | T478 | N90 | T478 | N90 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.5 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.29 | View |
E-L | E-L | N481 | S91 | N481 | S91 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
E-L | E-L | T478 | Y30 | T478 | Y30 | Hydrophobic | Hydrophobic | 0.52 | View |
E-L | E-L | E484 | Y92 | K484 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
E-L | E-L | N487 | Y30 | N487 | Y30 | Hydrophobic | Hydrophobic | 0.6 | View |
E-L | E-L | F486 | Y30 | F486 | Y30 | Hydrophobic | Hydrophobic | 0.47 | View |
E-L | E-L | F486 | L89 | F486 | L89 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7CDJ_africa_mut | E-L | T478 | Y30 | Hydrophobic | 4.43 | View |
7CDJ_africa_mut | E-L | C480 | S91 | Hydrogen Bonds | 3.78 | View |
7CDJ_africa_mut | E-L | F486 | Y30 | Hydrophobic | 4.03 | View |
7CDJ_africa_mut | E-L | F486 | Y30 | Hydrophobic | 4.30 | View |
7CDJ_africa_mut | E-L | F486 | Y30 | Hydrophobic | 4.00 | View |
7CDJ_africa_mut | E-L | F486 | Y30 | Hydrophobic | 4.02 | View |
7CDJ_africa_mut | E-L | F486 | N90 | Hydrogen Bonds | 3.72 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |