VTR

3 main matches found (3 matches in total )

Execution time: 59.0 seconds

Match RMSD = 0.35

VTR = 0.03

Average AVD = 0.32 Å

Parameters

Chains(7CAC.pdb ): B versus D

Chains(7CAC_africa_mut.pdb ) B versus D

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CAC 3499 0 0 3 0 0 0 3
B7CAC_africa_mut 3490 2 0 5 0 0 0 7

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-D B-D S375 N91 S375 N91 Hydrogen Bonds Hydrogen Bonds 0.52 View
B-D B-D F374 W93 F374 W93 Hydrogen Bonds Hydrogen Bonds 0.21 View
B-D B-D F374 F92 F374 F92 Hydrogen Bonds Hydrogen Bonds 0.22 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CAC | 7CAC_africa_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7CAC_africa_mut B-D A372 F92 Hydrophobic 4.46 View
7CAC_africa_mut B-D A372 F92 Hydrophobic 4.12 View
7CAC_africa_mut B-D S373 F92 Hydrogen Bonds 3.77 View
7CAC_africa_mut B-D S373 W93 Hydrogen Bonds 3.53 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph