Execution time: 31.0 seconds
Match RMSD = 0.61
VTR = 0.04
Average AVD = 0.53 Å
Chains(7C2L.pdb ): C versus J
Chains(7C2L_africa_mut.pdb ) C versus J
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7C2L | 4479 | 31 | 13 | 16 | 0 | 0 | 1 | 61 |
B7C2L_africa_mut | 4470 | 38 | 5 | 15 | 0 | 0 | 1 | 59 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.32 | View |
C-J | C-J | W152 | V102 | W152 | V102 | Hydrophobic | Hydrophobic | 0.42 | View |
C-J | C-J | H146 | T30 | H146 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
C-J | C-J | K150 | Y111 | K150 | Y111 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
C-J | C-J | K150 | P53 | K150 | P53 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.41 | View |
C-J | C-J | K147 | F51 | K147 | F51 | Hydrophobic | Hydrophobic | 0.43 | View |
C-J | C-J | H146 | T30 | H146 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
C-J | C-J | Y145 | A101 | Y145 | A101 | Hydrophobic | Hydrophobic | 0.42 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.33 | View |
C-J | C-J | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 0.6 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.29 | View |
C-J | C-J | H146 | T30 | H146 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
C-J | C-J | K147 | E72 | K147 | E72 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.73 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.33 | View |
C-J | C-J | L249 | A103 | L249 | A103 | Hydrophobic | Hydrophobic | 1.68 | View |
C-J | C-J | K147 | T30 | K147 | T30 | Hydrogen Bonds | Hydrogen Bonds | 1.01 | View |
C-J | C-J | W152 | F109 | W152 | F109 | Aromatic Stacking | Aromatic Stacking | 0.36 | View |
C-J | C-J | K147 | L29 | K147 | L29 | Hydrogen Bonds | Hydrogen Bonds | 0.85 | View |
C-J | C-J | Y248 | E31 | Y248 | E31 | Hydrogen Bonds | Hydrogen Bonds | 0.77 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.41 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.24 | View |
C-J | C-J | W152 | F109 | W152 | F109 | Hydrophobic | Hydrophobic | 0.95 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.29 | View |
C-J | C-J | K147 | L32 | K147 | L32 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
C-J | C-J | Y145 | A101 | Y145 | A101 | Hydrophobic | Hydrophobic | 0.42 | View |
C-J | C-J | K150 | E54 | K150 | E54 | Attractive | Attractive | 0.26 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.27 | View |
C-J | C-J | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 0.65 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.33 | View |
C-J | C-J | K150 | E54 | K150 | E54 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.33 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.39 | View |
C-J | C-J | Y248 | V102 | Y248 | V102 | Hydrophobic | Hydrophobic | 1.0 | View |
C-J | C-J | L249 | T100 | L249 | T100 | Hydrophobic | Hydrophobic | 0.98 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.3 | View |
C-J | C-J | W152 | P106 | W152 | P106 | Hydrophobic | Hydrophobic | 0.35 | View |
C-J | C-J | V143 | P106 | V143 | P106 | Hydrophobic | Hydrophobic | 0.36 | View |
C-J | C-J | W152 | F109 | W152 | F109 | Hydrophobic | Hydrophobic | 0.46 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.4 | View |
C-J | C-J | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 0.71 | View |
C-J | C-J | K147 | E72 | K147 | E72 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.83 | View |
C-J | C-J | Y248 | G104 | L249 | G104 | Hydrogen Bonds | Hydrogen Bonds | 1.11 | View |
C-J | C-J | Y145 | V102 | Y145 | V102 | Hydrophobic | Hydrophobic | 0.31 | View |
C-J | C-J | Y248 | V102 | Y248 | V102 | Hydrophobic | Hydrophobic | 0.93 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7C2L | C-J | H245 | P106 | Hydrophobic | 3.89 | View |
7C2L | C-J | R246 | E1 | Attractive | 5.64 | View |
7C2L | C-J | R246 | G26 | Hydrogen Bonds | 3.59 | View |
7C2L | C-J | R246 | E31 | Attractive | 5.35 | View |
7C2L | C-J | R246 | E31 | Attractive | 4.74 | View |
7C2L | C-J | R246 | E31 | Attractive | 5.13 | View |
7C2L | C-J | R246 | E31 | Attractive | 4.00 | View |
7C2L | C-J | R246 | E31 | Attractive | 4.78 | View |
7C2L | C-J | R246 | E31 | Attractive, Hydrogen Bonds | 3.44 | View |
7C2L | C-J | R246 | E31 | Attractive | 5.72 | View |
7C2L | C-J | R246 | E31 | Attractive | 4.36 | View |
7C2L | C-J | S247 | Y27 | Hydrogen Bonds | 3.75 | View |
7C2L | C-J | L249 | Y112 | Hydrophobic | 4.48 | View |
7C2L_africa_mut | C-J | Y144 | T30 | Hydrophobic | 4.36 | View |
7C2L_africa_mut | C-J | Y144 | T30 | Hydrophobic | 3.97 | View |
7C2L_africa_mut | C-J | Y145 | F109 | Hydrophobic | 4.35 | View |
7C2L_africa_mut | C-J | Y145 | F109 | Hydrophobic | 4.18 | View |
7C2L_africa_mut | C-J | K147 | A101 | Hydrophobic | 4.46 | View |
7C2L_africa_mut | C-J | R158 | E31 | Attractive | 5.71 | View |
7C2L_africa_mut | C-J | Y248 | G104 | Hydrogen Bonds | 3.83 | View |
7C2L_africa_mut | C-J | L249 | T100 | Hydrophobic | 4.43 | View |
7C2L_africa_mut | C-J | L249 | T100 | Hydrophobic | 3.63 | View |
7C2L_africa_mut | C-J | L249 | A103 | Hydrophobic | 3.80 | View |
7C2L_africa_mut | C-J | L249 | A103 | Hydrophobic | 4.12 | View |
7C2L_africa_mut | C-J | S256 | E1 | Hydrogen Bonds | 3.33 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |