Execution time: 11.0 seconds
Match RMSD = 0.59
VTR = 0.04
Average AVD = 0.55 Å
Chains(7C01.pdb ): B versus D
Chains(7C01_africa_mut.pdb ) B versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7C01 | 1256 | 8 | 0 | 5 | 0 | 0 | 2 | 15 |
B7C01_africa_mut | 1256 | 15 | 0 | 9 | 0 | 0 | 3 | 27 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Hydrophobic | Hydrophobic | 0.62 | View |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
B-D | B-D | R403 | Y92 | R403 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
B-D | B-D | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 1.09 | View |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Hydrophobic | Hydrophobic | 0.54 | View |
B-D | B-D | D405 | T94 | D405 | T94 | Hydrophobic | Hydrophobic | 0.48 | View |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Hydrophobic | Hydrophobic | 0.52 | View |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Hydrophobic | Hydrophobic | 0.68 | View |
B-D | B-D | R403 | Y92 | R403 | Y92 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
B-D | B-D | Y505 | Y32 | Y505 | Y32 | Hydrophobic | Hydrophobic | 0.82 | View |
B-D | B-D | Y505 | Y32 | Y505 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
B-D | B-D | Y505 | Y92 | Y505 | Y92 | Aromatic Stacking | Aromatic Stacking | 0.41 | View |
B-D | B-D | Y495 | Y32 | Y495 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
B-D | B-D | E406 | T94 | E406 | T94 | Hydrophobic | Hydrophobic | 0.56 | View |
B-D | B-D | Y505 | Y32 | Y505 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.26 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7C01_africa_mut | B-D | R403 | Y92 | Hydrogen Bonds | 2.81 | View |
7C01_africa_mut | B-D | D405 | Y92 | Hydrogen Bonds | 3.71 | View |
7C01_africa_mut | B-D | Y501 | S28 | Hydrogen Bonds | 3.12 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Aromatic Stacking | 4.90 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Hydrophobic | 4.42 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Hydrophobic | 4.39 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Hydrophobic | 3.64 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Hydrophobic | 4.20 | View |
7C01_africa_mut | B-D | Y501 | Y92 | Hydrogen Bonds | 2.69 | View |
7C01_africa_mut | B-D | Y505 | Y32 | Hydrophobic | 4.14 | View |
7C01_africa_mut | B-D | Y505 | Y92 | Hydrophobic | 4.26 | View |
7C01_africa_mut | B-D | Y505 | Y92 | Hydrophobic | 3.84 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |