Execution time: 10.0 seconds
Match RMSD = 0.4
VTR = 0.01
Average AVD = 0.37 Å
Chains(7C01.pdb ): A versus H
Chains(7C01_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7C01 | 1256 | 29 | 2 | 24 | 0 | 0 | 2 | 57 |
B7C01_africa_mut | 1256 | 32 | 0 | 27 | 0 | 0 | 2 | 61 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | F456 | M101 | F456 | M101 | Hydrophobic | Hydrophobic | 0.45 | View |
A-H | A-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.18 | View |
A-H | A-H | N487 | R97 | N487 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-H | A-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.18 | View |
A-H | A-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
A-H | A-H | Y489 | M101 | Y489 | M101 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Aromatic Stacking | Aromatic Stacking | 0.33 | View |
A-H | A-H | F486 | Y108 | F486 | Y108 | Hydrophobic | Hydrophobic | 0.18 | View |
A-H | A-H | Y489 | M101 | Y489 | M101 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | Y489 | R97 | Y489 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
A-H | A-H | F486 | Y108 | F486 | Y108 | Aromatic Stacking | Aromatic Stacking | 0.23 | View |
A-H | A-H | D420 | S56 | D420 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
A-H | A-H | L455 | P100 | L455 | P100 | Hydrophobic | Hydrophobic | 0.45 | View |
A-H | A-H | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
A-H | A-H | F456 | P100 | F456 | P100 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | Y473 | S31 | Y473 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
A-H | A-H | N487 | R97 | N487 | R97 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-H | A-H | F456 | P100 | F456 | P100 | Hydrophobic | Hydrophobic | 0.18 | View |
A-H | A-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
A-H | A-H | D420 | S56 | D420 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
A-H | A-H | K417 | Y52 | N417 | Y52 | Hydrophobic | Hydrophobic | 1.19 | View |
A-H | A-H | L455 | P100 | L455 | P100 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.38 | View |
A-H | A-H | F456 | P100 | F456 | P100 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
A-H | A-H | Y489 | M101 | Y489 | M101 | Hydrophobic | Hydrophobic | 0.31 | View |
A-H | A-H | G476 | T28 | G476 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
A-H | A-H | Y489 | M101 | Y489 | M101 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | N460 | S56 | N460 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
A-H | A-H | L455 | P100 | L455 | P100 | Hydrophobic | Hydrophobic | 0.43 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.21 | View |
A-H | A-H | F456 | P100 | F456 | P100 | Hydrophobic | Hydrophobic | 0.28 | View |
A-H | A-H | F456 | P100 | F456 | P100 | Hydrophobic | Hydrophobic | 0.26 | View |
A-H | A-H | F486 | Y108 | F486 | Y108 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.36 | View |
A-H | A-H | Y421 | Y52 | Y421 | Y52 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | N487 | G26 | N487 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
A-H | A-H | Y489 | L99 | Y489 | L99 | Hydrophobic | Hydrophobic | 0.44 | View |
A-H | A-H | A475 | N32 | A475 | N32 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
A-H | A-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.46 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.41 | View |
A-H | A-H | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
A-H | A-H | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
A-H | A-H | Q493 | Y102 | Q493 | Y102 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
A-H | A-H | L455 | M101 | L455 | M101 | Hydrophobic | Hydrophobic | 0.22 | View |
A-H | A-H | L455 | M101 | L455 | M101 | Hydrophobic | Hydrophobic | 0.22 | View |
A-H | A-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.3 | View |
A-H | A-H | Y489 | M101 | Y489 | M101 | Hydrophobic | Hydrophobic | 0.34 | View |
A-H | A-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-H | A-H | S477 | T28 | S477 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | R457 | G54 | R457 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7C01 | A-H | K417 | Y52 | Hydrogen Bonds | 3.74 | View |
7C01 | A-H | K417 | D104 | Attractive, Hydrogen Bonds | 3.63 | View |
7C01 | A-H | K417 | D104 | Attractive, Hydrogen Bonds | 3.62 | View |
7C01_africa_mut | A-H | N417 | Y33 | Hydrogen Bonds | 3.57 | View |
7C01_africa_mut | A-H | Y421 | Y33 | Hydrogen Bonds | 3.69 | View |
7C01_africa_mut | A-H | F456 | Y33 | Hydrophobic | 4.38 | View |
7C01_africa_mut | A-H | F456 | P100 | Hydrophobic | 4.46 | View |
7C01_africa_mut | A-H | N460 | G54 | Hydrogen Bonds | 3.82 | View |
7C01_africa_mut | A-H | Y473 | S31 | Hydrogen Bonds | 3.70 | View |
7C01_africa_mut | A-H | Q474 | S31 | Hydrogen Bonds | 3.85 | View |
7C01_africa_mut | A-H | A475 | S31 | Hydrogen Bonds | 3.63 | View |
7C01_africa_mut | A-H | Y489 | L99 | Hydrophobic | 4.44 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |